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Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes.
Poelwijk FJ, Tănase-Nicola S, Kiviet DJ, Tans SJ. Poelwijk FJ, et al. J Theor Biol. 2011 Mar 7;272(1):141-4. doi: 10.1016/j.jtbi.2010.12.015. Epub 2010 Dec 16. J Theor Biol. 2011. PMID: 21167837
Environmental dependence of genetic constraint.
de Vos MG, Poelwijk FJ, Battich N, Ndika JD, Tans SJ. de Vos MG, et al. Among authors: poelwijk fj. PLoS Genet. 2013 Jun;9(6):e1003580. doi: 10.1371/journal.pgen.1003580. Epub 2013 Jun 27. PLoS Genet. 2013. PMID: 23825963 Free PMC article.
Optimality in evolution: new insights from synthetic biology.
de Vos MG, Poelwijk FJ, Tans SJ. de Vos MG, et al. Among authors: poelwijk fj. Curr Opin Biotechnol. 2013 Aug;24(4):797-802. doi: 10.1016/j.copbio.2013.04.008. Epub 2013 May 16. Curr Opin Biotechnol. 2013. PMID: 23684729 Review.
Optimality and evolution of transcriptionally regulated gene expression.
Poelwijk FJ, Heyning PD, de Vos MG, Kiviet DJ, Tans SJ. Poelwijk FJ, et al. BMC Syst Biol. 2011 Aug 16;5:128. doi: 10.1186/1752-0509-5-128. BMC Syst Biol. 2011. PMID: 21846366 Free PMC article.
Tradeoffs and optimality in the evolution of gene regulation.
Poelwijk FJ, de Vos MG, Tans SJ. Poelwijk FJ, et al. Cell. 2011 Aug 5;146(3):462-70. doi: 10.1016/j.cell.2011.06.035. Epub 2011 Jul 28. Cell. 2011. PMID: 21802129
Empirical fitness landscapes reveal accessible evolutionary paths.
Poelwijk FJ, Kiviet DJ, Weinreich DM, Tans SJ. Poelwijk FJ, et al. Nature. 2007 Jan 25;445(7126):383-6. doi: 10.1038/nature05451. Nature. 2007. PMID: 17251971
The spatial architecture of protein function and adaptation.
McLaughlin RN Jr, Poelwijk FJ, Raman A, Gosal WS, Ranganathan R. McLaughlin RN Jr, et al. Among authors: poelwijk fj. Nature. 2012 Nov 1;491(7422):138-42. doi: 10.1038/nature11500. Epub 2012 Oct 7. Nature. 2012. PMID: 23041932 Free PMC article.
Mutation effects predicted from sequence co-variation.
Hopf TA, Ingraham JB, Poelwijk FJ, Schärfe CP, Springer M, Sander C, Marks DS. Hopf TA, et al. Among authors: poelwijk fj. Nat Biotechnol. 2017 Feb;35(2):128-135. doi: 10.1038/nbt.3769. Epub 2017 Jan 16. Nat Biotechnol. 2017. PMID: 28092658 Free PMC article.
Context-Dependent Mutation Effects in Proteins.
Poelwijk FJ. Poelwijk FJ. Methods Mol Biol. 2019;1851:123-134. doi: 10.1007/978-1-4939-8736-8_7. Methods Mol Biol. 2019. PMID: 30298395
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