Pons T - Search Results

1

A common structural scaffold in CTD phosphatases that supports distinct catalytic mechanisms.

Pons T, Paramonov I, Boullosa C, Ibáñez K, Rojas AM, Valencia A. Pons T, et al. Proteins. 2014 Jan;82(1):103-18. doi: 10.1002/prot.24376. Epub 2013 Sep 10. Proteins. 2014. PMID: 23900790

2

Structure-PPi: a module for the annotation of cancer-related single-nucleotide variants at protein-protein interfaces.

Vázquez M, Valencia A, Pons T. Vázquez M, et al. Among authors: pons t. Bioinformatics. 2015 Jul 15;31(14):2397-9. doi: 10.1093/bioinformatics/btv142. Epub 2015 Mar 11. Bioinformatics. 2015. PMID: 25765346 Free PMC article.

3

KinMutRF: a random forest classifier of sequence variants in the human protein kinase superfamily.

Pons T, Vazquez M, Matey-Hernandez ML, Brunak S, Valencia A, Izarzugaza JM. Pons T, et al. BMC Genomics. 2016 Jun 23;17 Suppl 2(Suppl 2):396. doi: 10.1186/s12864-016-2723-1. BMC Genomics. 2016. PMID: 27357839 Free PMC article.

4

wKinMut-2: Identification and Interpretation of Pathogenic Variants in Human Protein Kinases.

Vazquez M, Pons T, Brunak S, Valencia A, Izarzugaza JM. Vazquez M, et al. Among authors: pons t. Hum Mutat. 2016 Jan;37(1):36-42. doi: 10.1002/humu.22914. Epub 2015 Oct 20. Hum Mutat. 2016. PMID: 26443060

5

Predicting functional residues in Plasmodium falciparum plasmepsins by combining sequence and structural analysis with molecular dynamics simulations.

Valiente PA, Batista PR, Pupo A, Pons T, Valencia A, Pascutti PG. Valiente PA, et al. Among authors: pons t. Proteins. 2008 Nov 1;73(2):440-57. doi: 10.1002/prot.22068. Proteins. 2008. PMID: 18442137

6

Towards a detailed atlas of protein-protein interactions.

Mosca R, Pons T, Céol A, Valencia A, Aloy P. Mosca R, et al. Among authors: pons t. Curr Opin Struct Biol. 2013 Dec;23(6):929-40. doi: 10.1016/j.sbi.2013.07.005. Epub 2013 Jul 26. Curr Opin Struct Biol. 2013. PMID: 23896349 Review.

7

Structural model for family 32 of glycosyl-hydrolase enzymes.

Pons T, Olmea O, Chinea G, Beldarraín A, Márquez G, Acosta N, Rodríguez L, Valencia A. Pons T, et al. Proteins. 1998 Nov 15;33(3):383-95. doi: 10.1002/(sici)1097-0134(19981115)33:3<383::aid-prot7>3.0.co;2-r. Proteins. 1998. PMID: 9829697

8

Association Between Germline Mutations in BRF1, a Subunit of the RNA Polymerase III Transcription Complex, and Hereditary Colorectal Cancer.

Bellido F, Sowada N, Mur P, Lázaro C, Pons T, Valdés-Mas R, Pineda M, Aiza G, Iglesias S, Soto JL, Urioste M, Caldés T, Balbín M, Blay P, Rueda D, Durán M, Valencia A, Moreno V, Brunet J, Blanco I, Navarro M, Calin GA, Borck G, Puente XS, Capellá G, Valle L. Bellido F, et al. Among authors: pons t. Gastroenterology. 2018 Jan;154(1):181-194.e20. doi: 10.1053/j.gastro.2017.09.005. Epub 2017 Sep 12. Gastroenterology. 2018. PMID: 28912018

9

Structural model of Dex protein from Penicillium minioluteum and its implications in the mechanism of catalysis.

Pons T, Chinea G, Olmea O, Beldarraín A, Roca H, Padrón G, Valencia A. Pons T, et al. Proteins. 1998 Jun 1;31(4):345-54. doi: 10.1002/(sici)1097-0134(19980601)31:4<345::aid-prot2>3.0.co;2-h. Proteins. 1998. PMID: 9626695

10

Comparison of algorithms for the detection of cancer drivers at subgene resolution.

Porta-Pardo E, Kamburov A, Tamborero D, Pons T, Grases D, Valencia A, Lopez-Bigas N, Getz G, Godzik A. Porta-Pardo E, et al. Among authors: pons t. Nat Methods. 2017 Aug;14(8):782-788. doi: 10.1038/nmeth.4364. Epub 2017 Jul 17. Nat Methods. 2017. PMID: 28714987 Free PMC article.

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