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Application of normal-mode refinement to X-ray crystal structures at the lower resolution limit.

Ni F, Poon BK, Wang Q, Ma J. Ni F, et al. Among authors: poon bk. Acta Crystallogr D Biol Crystallogr. 2009 Jul;65(Pt 7):633-43. doi: 10.1107/S0907444909010695. Epub 2009 Jun 20. Acta Crystallogr D Biol Crystallogr. 2009. PMID: 19564683 Free PMC article.

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Normal mode refinement of anisotropic thermal parameters for a supramolecular complex at 3.42-A crystallographic resolution.

Poon BK, Chen X, Lu M, Vyas NK, Quiocho FA, Wang Q, Ma J. Poon BK, et al. Proc Natl Acad Sci U S A. 2007 May 8;104(19):7869-74. doi: 10.1073/pnas.0701204104. Epub 2007 Apr 30. Proc Natl Acad Sci U S A. 2007. PMID: 17470791 Free PMC article.

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Normal-mode refinement of anisotropic thermal parameters for potassium channel KcsA at 3.2 A crystallographic resolution.

Chen X, Poon BK, Dousis A, Wang Q, Ma J. Chen X, et al. Among authors: poon bk. Structure. 2007 Aug;15(8):955-62. doi: 10.1016/j.str.2007.06.012. Structure. 2007. PMID: 17698000 Free PMC article.

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Structural improvement of unliganded simian immunodeficiency virus gp120 core by normal-mode-based X-ray crystallographic refinement.

Chen X, Lu M, Poon BK, Wang Q, Ma J. Chen X, et al. Among authors: poon bk. Acta Crystallogr D Biol Crystallogr. 2009 Apr;65(Pt 4):339-47. doi: 10.1107/S0907444909003539. Epub 2009 Mar 19. Acta Crystallogr D Biol Crystallogr. 2009. PMID: 19307715 Free PMC article.

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Detection and correction of underassigned rotational symmetry prior to structure deposition.

Poon BK, Grosse-Kunstleve RW, Zwart PH, Sauter NK. Poon BK, et al. Acta Crystallogr D Biol Crystallogr. 2010 May;66(Pt 5):503-13. doi: 10.1107/S0907444910001502. Epub 2010 Apr 21. Acta Crystallogr D Biol Crystallogr. 2010. PMID: 20445225 Free PMC article.

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A New Method for Coarse-Grained Elastic Normal-Mode Analysis.

Lu M, Poon B, Ma J. Lu M, et al. J Chem Theory Comput. 2006;2(3):464-471. doi: 10.1021/ct050307u. J Chem Theory Comput. 2006. PMID: 21760758 Free PMC article.

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Three-dimensional single-particle imaging using angular correlations from X-ray laser data.

Liu H, Poon BK, Saldin DK, Spence JC, Zwart PH. Liu H, et al. Among authors: poon bk. Acta Crystallogr A. 2013 Jul;69(Pt 4):365-73. doi: 10.1107/S0108767313006016. Epub 2013 May 8. Acta Crystallogr A. 2013. PMID: 23778093

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Polder maps: improving OMIT maps by excluding bulk solvent.

Liebschner D, Afonine PV, Moriarty NW, Poon BK, Sobolev OV, Terwilliger TC, Adams PD. Liebschner D, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2017 Feb 1;73(Pt 2):148-157. doi: 10.1107/S2059798316018210. Epub 2017 Feb 1. Acta Crystallogr D Struct Biol. 2017. PMID: 28177311 Free PMC article.

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Real-space refinement in PHENIX for cryo-EM and crystallography.

Afonine PV, Poon BK, Read RJ, Sobolev OV, Terwilliger TC, Urzhumtsev A, Adams PD. Afonine PV, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2018 Jun 1;74(Pt 6):531-544. doi: 10.1107/S2059798318006551. Epub 2018 May 30. Acta Crystallogr D Struct Biol. 2018. PMID: 29872004 Free PMC article.

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New tools for the analysis and validation of cryo-EM maps and atomic models.

Afonine PV, Klaholz BP, Moriarty NW, Poon BK, Sobolev OV, Terwilliger TC, Adams PD, Urzhumtsev A. Afonine PV, et al. Among authors: poon bk. Acta Crystallogr D Struct Biol. 2018 Sep 1;74(Pt 9):814-840. doi: 10.1107/S2059798318009324. Epub 2018 Sep 3. Acta Crystallogr D Struct Biol. 2018. PMID: 30198894 Free PMC article.

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