Popova T - Search Results

1

A common alternative splicing signature is associated with SF3B1 mutations in malignancies from different cell lineages.

Gentien D, Kosmider O, Nguyen-Khac F, Albaud B, Rapinat A, Dumont AG, Damm F, Popova T, Marais R, Fontenay M, Roman-Roman S, Bernard OA, Stern MH. Gentien D, et al. Among authors: popova t. Leukemia. 2014 Jun;28(6):1355-7. doi: 10.1038/leu.2014.28. Epub 2014 Jan 17. Leukemia. 2014. PMID: 24434863 No abstract available.

2

Histo-genomic stratification reveals the frequent amplification/overexpression of CCNE1 and BRD4 genes in non-BRCAness high grade ovarian carcinoma.

Goundiam O, Gestraud P, Popova T, De la Motte Rouge T, Fourchotte V, Gentien D, Hupé P, Becette V, Houdayer C, Roman-Roman S, Stern MH, Sastre-Garau X. Goundiam O, et al. Among authors: popova t. Int J Cancer. 2015 Oct 15;137(8):1890-900. doi: 10.1002/ijc.29568. Epub 2015 Apr 29. Int J Cancer. 2015. PMID: 25892415 Free article.

3

Cancer-associated SF3B1 mutations affect alternative splicing by promoting alternative branchpoint usage.

Alsafadi S, Houy A, Battistella A, Popova T, Wassef M, Henry E, Tirode F, Constantinou A, Piperno-Neumann S, Roman-Roman S, Dutertre M, Stern MH. Alsafadi S, et al. Among authors: popova t. Nat Commun. 2016 Feb 4;7:10615. doi: 10.1038/ncomms10615. Nat Commun. 2016. PMID: 26842708 Free PMC article.

4

Genetic alterations of SUGP1 mimic mutant-SF3B1 splice pattern in lung adenocarcinoma and other cancers.

Alsafadi S, Dayot S, Tarin M, Houy A, Bellanger D, Cornella M, Wassef M, Waterfall JJ, Lehnert E, Roman-Roman S, Stern MH, Popova T. Alsafadi S, et al. Among authors: popova t. Oncogene. 2021 Jan;40(1):85-96. doi: 10.1038/s41388-020-01507-5. Epub 2020 Oct 14. Oncogene. 2021. PMID: 33057152 Free PMC article.

5

Functional and conformational impact of cancer-associated SF3B1 mutations depends on the position and the charge of amino acid substitution.

Canbezdi C, Tarin M, Houy A, Bellanger D, Popova T, Stern MH, Roman-Roman S, Alsafadi S. Canbezdi C, et al. Among authors: popova t. Comput Struct Biotechnol J. 2021 Feb 27;19:1361-1370. doi: 10.1016/j.csbj.2021.02.012. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 33777335 Free PMC article.

6

Multi-factor data normalization enables the detection of copy number aberrations in amplicon sequencing data.

Boeva V, Popova T, Lienard M, Toffoli S, Kamal M, Le Tourneau C, Gentien D, Servant N, Gestraud P, Rio Frio T, Hupé P, Barillot E, Laes JF. Boeva V, et al. Among authors: popova t. Bioinformatics. 2014 Dec 15;30(24):3443-50. doi: 10.1093/bioinformatics/btu436. Epub 2014 Jul 12. Bioinformatics. 2014. PMID: 25016581 Free PMC article.

7

The inactive X chromosome is epigenetically unstable and transcriptionally labile in breast cancer.

Chaligné R, Popova T, Mendoza-Parra MA, Saleem MA, Gentien D, Ban K, Piolot T, Leroy O, Mariani O, Gronemeyer H, Vincent-Salomon A, Stern MH, Heard E. Chaligné R, et al. Among authors: popova t. Genome Res. 2015 Apr;25(4):488-503. doi: 10.1101/gr.185926.114. Epub 2015 Feb 4. Genome Res. 2015. PMID: 25653311 Free PMC article.

8

Outlier response to anti-PD1 in uveal melanoma reveals germline MBD4 mutations in hypermutated tumors.

Rodrigues M, Mobuchon L, Houy A, Fiévet A, Gardrat S, Barnhill RL, Popova T, Servois V, Rampanou A, Mouton A, Dayot S, Raynal V, Galut M, Putterman M, Tick S, Cassoux N, Roman-Roman S, Bidard FC, Lantz O, Mariani P, Piperno-Neumann S, Stern MH. Rodrigues M, et al. Among authors: popova t. Nat Commun. 2018 May 14;9(1):1866. doi: 10.1038/s41467-018-04322-5. Nat Commun. 2018. PMID: 29760383 Free PMC article.

9

Splicing Patterns in SF3B1-Mutated Uveal Melanoma Generate Shared Immunogenic Tumor-Specific Neoepitopes.

Bigot J, Lalanne AI, Lucibello F, Gueguen P, Houy A, Dayot S, Ganier O, Gilet J, Tosello J, Nemati F, Pierron G, Waterfall JJ, Barnhill R, Gardrat S, Piperno-Neumann S, Popova T, Masson V, Loew D, Mariani P, Cassoux N, Amigorena S, Rodrigues M, Alsafadi S, Stern MH, Lantz O. Bigot J, et al. Among authors: popova t. Cancer Discov. 2021 Aug;11(8):1938-1951. doi: 10.1158/2159-8290.CD-20-0555. Epub 2021 Apr 2. Cancer Discov. 2021. PMID: 33811047

10

Multilayer spectrum of intratumoral heterogeneity in basal bladder cancer.

Sirab N, Drubay D, Maillé P, Popova T, Ngo C, Gentien D, Moktefi A, Soyeux-Porte P, Pelletier R, Reyes C, Henry E, Pouessel D, Vordos D, Lebret T, de Reyniès A, Paoletti X, Radvanyi F, Allory Y. Sirab N, et al. Among authors: popova t. J Pathol. 2022 Jan;256(1):108-118. doi: 10.1002/path.5813. Epub 2021 Nov 9. J Pathol. 2022. PMID: 34611919

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