Posada D - Search Results

1

NGSphy: phylogenomic simulation of next-generation sequencing data.

Escalona M, Rocha S, Posada D. Escalona M, et al. Among authors: posada d. Bioinformatics. 2018 Jul 15;34(14):2506-2507. doi: 10.1093/bioinformatics/bty146. Bioinformatics. 2018. PMID: 29534152

2

ProtTest: selection of best-fit models of protein evolution.

Abascal F, Zardoya R, Posada D. Abascal F, et al. Among authors: posada d. Bioinformatics. 2005 May 1;21(9):2104-5. doi: 10.1093/bioinformatics/bti263. Epub 2005 Jan 12. Bioinformatics. 2005. PMID: 15647292

3

TreeScan: a bioinformatic application to search for genotype/phenotype associations using haplotype trees.

Posada D, Maxwell TJ, Templeton AR. Posada D, et al. Bioinformatics. 2005 May 1;21(9):2130-2. doi: 10.1093/bioinformatics/bti293. Epub 2005 Jan 28. Bioinformatics. 2005. PMID: 15681571

4

GARD: a genetic algorithm for recombination detection.

Kosakovsky Pond SL, Posada D, Gravenor MB, Woelk CH, Frost SD. Kosakovsky Pond SL, et al. Among authors: posada d. Bioinformatics. 2006 Dec 15;22(24):3096-8. doi: 10.1093/bioinformatics/btl474. Epub 2006 Nov 16. Bioinformatics. 2006. PMID: 17110367

5

Recodon: coalescent simulation of coding DNA sequences with recombination, migration and demography.

Arenas M, Posada D. Arenas M, et al. Among authors: posada d. BMC Bioinformatics. 2007 Nov 20;8:458. doi: 10.1186/1471-2105-8-458. BMC Bioinformatics. 2007. PMID: 18028540 Free PMC article.

6

Characterization of phylogenetic networks with NetTest.

Arenas M, Patricio M, Posada D, Valiente G. Arenas M, et al. Among authors: posada d. BMC Bioinformatics. 2010 May 20;11:268. doi: 10.1186/1471-2105-11-268. BMC Bioinformatics. 2010. PMID: 20487540 Free PMC article.

7

ProtTest 3: fast selection of best-fit models of protein evolution.

Darriba D, Taboada GL, Doallo R, Posada D. Darriba D, et al. Among authors: posada d. Bioinformatics. 2011 Apr 15;27(8):1164-5. doi: 10.1093/bioinformatics/btr088. Epub 2011 Feb 17. Bioinformatics. 2011. PMID: 21335321 Free PMC article.

8

Genome-wide heterogeneity of nucleotide substitution model fit.

Arbiza L, Patricio M, Dopazo H, Posada D. Arbiza L, et al. Among authors: posada d. Genome Biol Evol. 2011;3:896-908. doi: 10.1093/gbe/evr080. Epub 2011 Aug 7. Genome Biol Evol. 2011. PMID: 21824869 Free PMC article.

9

Protein evolution along phylogenetic histories under structurally constrained substitution models.

Arenas M, Dos Santos HG, Posada D, Bastolla U. Arenas M, et al. Among authors: posada d. Bioinformatics. 2013 Dec 1;29(23):3020-8. doi: 10.1093/bioinformatics/btt530. Epub 2013 Sep 12. Bioinformatics. 2013. PMID: 24037213 Free PMC article.

10

jmodeltest.org: selection of nucleotide substitution models on the cloud.

Santorum JM, Darriba D, Taboada GL, Posada D. Santorum JM, et al. Among authors: posada d. Bioinformatics. 2014 May 1;30(9):1310-1. doi: 10.1093/bioinformatics/btu032. Epub 2014 Jan 21. Bioinformatics. 2014. PMID: 24451621 Free PMC article.

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