Pratt G - Search Results

1

Musashi-2 attenuates AHR signalling to expand human haematopoietic stem cells.

Rentas S, Holzapfel N, Belew MS, Pratt G, Voisin V, Wilhelm BT, Bader GD, Yeo GW, Hope KJ. Rentas S, et al. Among authors: pratt g. Nature. 2016 Apr 28;532(7600):508-511. doi: 10.1038/nature17665. Nature. 2016. PMID: 27121842 Free PMC article.

2

Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP).

Van Nostrand EL, Pratt GA, Shishkin AA, Gelboin-Burkhart C, Fang MY, Sundararaman B, Blue SM, Nguyen TB, Surka C, Elkins K, Stanton R, Rigo F, Guttman M, Yeo GW. Van Nostrand EL, et al. Nat Methods. 2016 Jun;13(6):508-14. doi: 10.1038/nmeth.3810. Epub 2016 Mar 28. Nat Methods. 2016. PMID: 27018577 Free PMC article.

3

Enhanced CLIP Uncovers IMP Protein-RNA Targets in Human Pluripotent Stem Cells Important for Cell Adhesion and Survival.

Conway AE, Van Nostrand EL, Pratt GA, Aigner S, Wilbert ML, Sundararaman B, Freese P, Lambert NJ, Sathe S, Liang TY, Essex A, Landais S, Burge CB, Jones DL, Yeo GW. Conway AE, et al. Cell Rep. 2016 Apr 19;15(3):666-679. doi: 10.1016/j.celrep.2016.03.052. Epub 2016 Apr 7. Cell Rep. 2016. PMID: 27068461 Free PMC article.

4

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses.

Kapeli K, Pratt GA, Vu AQ, Hutt KR, Martinez FJ, Sundararaman B, Batra R, Freese P, Lambert NJ, Huelga SC, Chun SJ, Liang TY, Chang J, Donohue JP, Shiue L, Zhang J, Zhu H, Cambi F, Kasarskis E, Hoon S, Ares M Jr, Burge CB, Ravits J, Rigo F, Yeo GW. Kapeli K, et al. Nat Commun. 2016 Jul 5;7:12143. doi: 10.1038/ncomms12143. Nat Commun. 2016. PMID: 27378374 Free PMC article.

5

Variation in single-nucleotide sensitivity of eCLIP derived from reverse transcription conditions.

Van Nostrand EL, Shishkin AA, Pratt GA, Nguyen TB, Yeo GW. Van Nostrand EL, et al. Methods. 2017 Aug 15;126:29-37. doi: 10.1016/j.ymeth.2017.08.002. Epub 2017 Aug 5. Methods. 2017. PMID: 28790018 Free PMC article.

6

A large-scale binding and functional map of human RNA-binding proteins.

Van Nostrand EL, Freese P, Pratt GA, Wang X, Wei X, Xiao R, Blue SM, Chen JY, Cody NAL, Dominguez D, Olson S, Sundararaman B, Zhan L, Bazile C, Bouvrette LPB, Bergalet J, Duff MO, Garcia KE, Gelboin-Burkhart C, Hochman M, Lambert NJ, Li H, McGurk MP, Nguyen TB, Palden T, Rabano I, Sathe S, Stanton R, Su A, Wang R, Yee BA, Zhou B, Louie AL, Aigner S, Fu XD, Lécuyer E, Burge CB, Graveley BR, Yeo GW. Van Nostrand EL, et al. Nature. 2020 Jul;583(7818):711-719. doi: 10.1038/s41586-020-2077-3. Epub 2020 Jul 29. Nature. 2020. PMID: 32728246 Free PMC article.

7

Transcriptome-wide identification of RNA-binding protein binding sites using seCLIP-seq.

Blue SM, Yee BA, Pratt GA, Mueller JR, Park SS, Shishkin AA, Starner AC, Van Nostrand EL, Yeo GW. Blue SM, et al. Nat Protoc. 2022 May;17(5):1223-1265. doi: 10.1038/s41596-022-00680-z. Epub 2022 Mar 23. Nat Protoc. 2022. PMID: 35322209 Review.

8

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges.

Lovci MT, Ghanem D, Marr H, Arnold J, Gee S, Parra M, Liang TY, Stark TJ, Gehman LT, Hoon S, Massirer KB, Pratt GA, Black DL, Gray JW, Conboy JG, Yeo GW. Lovci MT, et al. Among authors: pratt ga. Nat Struct Mol Biol. 2013 Dec;20(12):1434-42. doi: 10.1038/nsmb.2699. Epub 2013 Nov 10. Nat Struct Mol Biol. 2013. PMID: 24213538 Free PMC article.

9

CRISPR/Cas9-mediated integration enables TAG-eCLIP of endogenously tagged RNA binding proteins.

Van Nostrand EL, Gelboin-Burkhart C, Wang R, Pratt GA, Blue SM, Yeo GW. Van Nostrand EL, et al. Methods. 2017 Apr 15;118-119:50-59. doi: 10.1016/j.ymeth.2016.12.007. Epub 2016 Dec 18. Methods. 2017. PMID: 28003131 Free PMC article.

10

RBP-Maps enables robust generation of splicing regulatory maps.

Yee BA, Pratt GA, Graveley BR, Van Nostrand EL, Yeo GW. Yee BA, et al. RNA. 2019 Feb;25(2):193-204. doi: 10.1261/rna.069237.118. Epub 2018 Nov 9. RNA. 2019. PMID: 30413564 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

585 results

Search Page