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Population structure and eigenanalysis.
Patterson N, Price AL, Reich D. Patterson N, et al. Among authors: price al. PLoS Genet. 2006 Dec;2(12):e190. doi: 10.1371/journal.pgen.0020190. PLoS Genet. 2006. PMID: 17194218 Free PMC article.
Explicit Modeling of Ancestry Improves Polygenic Risk Scores and BLUP Prediction.
Chen CY, Han J, Hunter DJ, Kraft P, Price AL. Chen CY, et al. Among authors: price al. Genet Epidemiol. 2015 Sep;39(6):427-38. doi: 10.1002/gepi.21906. Epub 2015 May 21. Genet Epidemiol. 2015. PMID: 25995153 Free PMC article.
Improved ancestry inference using weights from external reference panels.
Chen CY, Pollack S, Hunter DJ, Hirschhorn JN, Kraft P, Price AL. Chen CY, et al. Among authors: price al. Bioinformatics. 2013 Jun 1;29(11):1399-406. doi: 10.1093/bioinformatics/btt144. Epub 2013 Mar 28. Bioinformatics. 2013. PMID: 23539302 Free PMC article.
AVAILABILITY: The SNPweights software is available online at http://www.hsph.harvard.edu/faculty/alkes-price/software/. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online....
AVAILABILITY: The SNPweights software is available online at http://www.hsph.harvard.edu/faculty/alkes-price/software/. SUPPLEMENTARY …
Pooled association tests for rare variants in exon-resequencing studies.
Price AL, Kryukov GV, de Bakker PI, Purcell SM, Staples J, Wei LJ, Sunyaev SR. Price AL, et al. Am J Hum Genet. 2010 Jun 11;86(6):832-8. doi: 10.1016/j.ajhg.2010.04.005. Epub 2010 May 13. Am J Hum Genet. 2010. PMID: 20471002 Free PMC article.
Integrating functional data to prioritize causal variants in statistical fine-mapping studies.
Kichaev G, Yang WY, Lindstrom S, Hormozdiari F, Eskin E, Price AL, Kraft P, Pasaniuc B. Kichaev G, et al. Among authors: price al. PLoS Genet. 2014 Oct 30;10(10):e1004722. doi: 10.1371/journal.pgen.1004722. eCollection 2014 Oct. PLoS Genet. 2014. PMID: 25357204 Free PMC article.
Informed conditioning on clinical covariates increases power in case-control association studies.
Zaitlen N, Lindström S, Pasaniuc B, Cornelis M, Genovese G, Pollack S, Barton A, Bickeböller H, Bowden DW, Eyre S, Freedman BI, Friedman DJ, Field JK, Groop L, Haugen A, Heinrich J, Henderson BE, Hicks PJ, Hocking LJ, Kolonel LN, Landi MT, Langefeld CD, Le Marchand L, Meister M, Morgan AW, Raji OY, Risch A, Rosenberger A, Scherf D, Steer S, Walshaw M, Waters KM, Wilson AG, Wordsworth P, Zienolddiny S, Tchetgen ET, Haiman C, Hunter DJ, Plenge RM, Worthington J, Christiani DC, Schaumberg DA, Chasman DI, Altshuler D, Voight B, Kraft P, Patterson N, Price AL. Zaitlen N, et al. Among authors: price al. PLoS Genet. 2012;8(11):e1003032. doi: 10.1371/journal.pgen.1003032. Epub 2012 Nov 8. PLoS Genet. 2012. PMID: 23144628 Free PMC article.
Reconstructing Native American population history.
Reich D, Patterson N, Campbell D, Tandon A, Mazieres S, Ray N, Parra MV, Rojas W, Duque C, Mesa N, García LF, Triana O, Blair S, Maestre A, Dib JC, Bravi CM, Bailliet G, Corach D, Hünemeier T, Bortolini MC, Salzano FM, Petzl-Erler ML, Acuña-Alonzo V, Aguilar-Salinas C, Canizales-Quinteros S, Tusié-Luna T, Riba L, Rodríguez-Cruz M, Lopez-Alarcón M, Coral-Vazquez R, Canto-Cetina T, Silva-Zolezzi I, Fernandez-Lopez JC, Contreras AV, Jimenez-Sanchez G, Gómez-Vázquez MJ, Molina J, Carracedo A, Salas A, Gallo C, Poletti G, Witonsky DB, Alkorta-Aranburu G, Sukernik RI, Osipova L, Fedorova SA, Vasquez R, Villena M, Moreau C, Barrantes R, Pauls D, Excoffier L, Bedoya G, Rothhammer F, Dugoujon JM, Larrouy G, Klitz W, Labuda D, Kidd J, Kidd K, Di Rienzo A, Freimer NB, Price AL, Ruiz-Linares A. Reich D, et al. Among authors: price al. Nature. 2012 Aug 16;488(7411):370-4. doi: 10.1038/nature11258. Nature. 2012. PMID: 22801491 Free PMC article.
Exome sequencing and the genetic basis of complex traits.
Kiezun A, Garimella K, Do R, Stitziel NO, Neale BM, McLaren PJ, Gupta N, Sklar P, Sullivan PF, Moran JL, Hultman CM, Lichtenstein P, Magnusson P, Lehner T, Shugart YY, Price AL, de Bakker PI, Purcell SM, Sunyaev SR. Kiezun A, et al. Among authors: price al. Nat Genet. 2012 May 29;44(6):623-30. doi: 10.1038/ng.2303. Nat Genet. 2012. PMID: 22641211 Free PMC article.
Extremely low-coverage sequencing and imputation increases power for genome-wide association studies.
Pasaniuc B, Rohland N, McLaren PJ, Garimella K, Zaitlen N, Li H, Gupta N, Neale BM, Daly MJ, Sklar P, Sullivan PF, Bergen S, Moran JL, Hultman CM, Lichtenstein P, Magnusson P, Purcell SM, Haas DW, Liang L, Sunyaev S, Patterson N, de Bakker PI, Reich D, Price AL. Pasaniuc B, et al. Among authors: price al. Nat Genet. 2012 May 20;44(6):631-5. doi: 10.1038/ng.2283. Nat Genet. 2012. PMID: 22610117 Free PMC article.
Enhanced statistical tests for GWAS in admixed populations: assessment using African Americans from CARe and a Breast Cancer Consortium.
Pasaniuc B, Zaitlen N, Lettre G, Chen GK, Tandon A, Kao WH, Ruczinski I, Fornage M, Siscovick DS, Zhu X, Larkin E, Lange LA, Cupples LA, Yang Q, Akylbekova EL, Musani SK, Divers J, Mychaleckyj J, Li M, Papanicolaou GJ, Millikan RC, Ambrosone CB, John EM, Bernstein L, Zheng W, Hu JJ, Ziegler RG, Nyante SJ, Bandera EV, Ingles SA, Press MF, Chanock SJ, Deming SL, Rodriguez-Gil JL, Palmer CD, Buxbaum S, Ekunwe L, Hirschhorn JN, Henderson BE, Myers S, Haiman CA, Reich D, Patterson N, Wilson JG, Price AL. Pasaniuc B, et al. Among authors: price al. PLoS Genet. 2011 Apr;7(4):e1001371. doi: 10.1371/journal.pgen.1001371. Epub 2011 Apr 21. PLoS Genet. 2011. PMID: 21541012 Free PMC article.
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