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Lessons from the DREAM2 Challenges.
Stolovitzky G, Prill RJ, Califano A. Stolovitzky G, et al. Among authors: prill rj. Ann N Y Acad Sci. 2009 Mar;1158:159-95. doi: 10.1111/j.1749-6632.2009.04497.x. Ann N Y Acad Sci. 2009. PMID: 19348640
[No authors listed] [No authors listed] PMID: 27162635
Noise-driven causal inference in biomolecular networks.
Prill RJ, Vogel R, Cecchi GA, Altan-Bonnet G, Stolovitzky G. Prill RJ, et al. PLoS One. 2015 Jun 1;10(6):e0125777. doi: 10.1371/journal.pone.0125777. eCollection 2015. PLoS One. 2015. PMID: 26030907 Free PMC article.
A computational method for designing diverse linear epitopes including citrullinated peptides with desired binding affinities to intravenous immunoglobulin.
Patro R, Norel R, Prill RJ, Saez-Rodriguez J, Lorenz P, Steinbeck F, Ziems B, Luštrek M, Barbarini N, Tiengo A, Bellazzi R, Thiesen HJ, Stolovitzky G, Kingsford C. Patro R, et al. Among authors: prill rj. BMC Bioinformatics. 2016 Apr 8;17:155. doi: 10.1186/s12859-016-1008-7. BMC Bioinformatics. 2016. PMID: 27059896 Free PMC article.
Revealing strengths and weaknesses of methods for gene network inference.
Marbach D, Prill RJ, Schaffter T, Mattiussi C, Floreano D, Stolovitzky G. Marbach D, et al. Among authors: prill rj. Proc Natl Acad Sci U S A. 2010 Apr 6;107(14):6286-91. doi: 10.1073/pnas.0913357107. Epub 2010 Mar 22. Proc Natl Acad Sci U S A. 2010. PMID: 20308593 Free PMC article.
DREAMTools: a Python package for scoring collaborative challenges.
Cokelaer T, Bansal M, Bare C, Bilal E, Bot BM, Chaibub Neto E, Eduati F, de la Fuente A, Gönen M, Hill SM, Hoff B, Karr JR, Küffner R, Menden MP, Meyer P, Norel R, Pratap A, Prill RJ, Weirauch MT, Costello JC, Stolovitzky G, Saez-Rodriguez J. Cokelaer T, et al. Among authors: prill rj. F1000Res. 2015 Oct 9;4:1030. doi: 10.12688/f1000research.7118.2. eCollection 2015. F1000Res. 2015. PMID: 27134723 Free PMC article.
Wisdom of crowds for robust gene network inference.
Marbach D, Costello JC, Küffner R, Vega NM, Prill RJ, Camacho DM, Allison KR; DREAM5 Consortium, Kellis M, Collins JJ, Stolovitzky G. Marbach D, et al. Among authors: prill rj. Nat Methods. 2012 Jul 15;9(8):796-804. doi: 10.1038/nmeth.2016. Nat Methods. 2012. PMID: 22796662 Free PMC article.
31 results