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Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation.
Proserpio V, Piccolo A, Haim-Vilmovsky L, Kar G, Lönnberg T, Svensson V, Pramanik J, Natarajan KN, Zhai W, Zhang X, Donati G, Kayikci M, Kotar J, McKenzie AN, Montandon R, Billker O, Woodhouse S, Cicuta P, Nicodemi M, Teichmann SA. Proserpio V, et al. Genome Biol. 2016 May 12;17:103. doi: 10.1186/s13059-016-0957-5. Genome Biol. 2016. PMID: 27176874 Free PMC article.
Accounting for technical noise in single-cell RNA-seq experiments.
Brennecke P, Anders S, Kim JK, Kołodziejczyk AA, Zhang X, Proserpio V, Baying B, Benes V, Teichmann SA, Marioni JC, Heisler MG. Brennecke P, et al. Among authors: proserpio v. Nat Methods. 2013 Nov;10(11):1093-5. doi: 10.1038/nmeth.2645. Epub 2013 Sep 22. Nat Methods. 2013. PMID: 24056876
Single-cell RNA sequencing reveals T helper cells synthesizing steroids de novo to contribute to immune homeostasis.
Mahata B, Zhang X, Kolodziejczyk AA, Proserpio V, Haim-Vilmovsky L, Taylor AE, Hebenstreit D, Dingler FA, Moignard V, Göttgens B, Arlt W, McKenzie AN, Teichmann SA. Mahata B, et al. Among authors: proserpio v. Cell Rep. 2014 May 22;7(4):1130-42. doi: 10.1016/j.celrep.2014.04.011. Epub 2014 May 10. Cell Rep. 2014. PMID: 24813893 Free PMC article.
Single-cell technologies to study the immune system.
Proserpio V, Mahata B. Proserpio V, et al. Immunology. 2016 Feb;147(2):133-40. doi: 10.1111/imm.12553. Epub 2015 Dec 27. Immunology. 2016. PMID: 26551575 Free PMC article. Review.
T cell fate and clonality inference from single-cell transcriptomes.
Stubbington MJT, Lönnberg T, Proserpio V, Clare S, Speak AO, Dougan G, Teichmann SA. Stubbington MJT, et al. Among authors: proserpio v. Nat Methods. 2016 Apr;13(4):329-332. doi: 10.1038/nmeth.3800. Epub 2016 Mar 7. Nat Methods. 2016. PMID: 26950746 Free PMC article.
31 results