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336 results
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Computational analysis of microarray data.
Quackenbush J. Quackenbush J. Nat Rev Genet. 2001 Jun;2(6):418-27. doi: 10.1038/35076576. Nat Rev Genet. 2001. PMID: 11389458 Review.
The complete genome sequence of the gastric pathogen Helicobacter pylori.
Tomb JF, White O, Kerlavage AR, Clayton RA, Sutton GG, Fleischmann RD, Ketchum KA, Klenk HP, Gill S, Dougherty BA, Nelson K, Quackenbush J, Zhou L, Kirkness EF, Peterson S, Loftus B, Richardson D, Dodson R, Khalak HG, Glodek A, McKenney K, Fitzegerald LM, Lee N, Adams MD, Hickey EK, Berg DE, Gocayne JD, Utterback TR, Peterson JD, Kelley JM, Cotton MD, Weidman JM, Fujii C, Bowman C, Watthey L, Wallin E, Hayes WS, Borodovsky M, Karp PD, Smith HO, Fraser CM, Venter JC. Tomb JF, et al. Among authors: quackenbush j. Nature. 1997 Aug 7;388(6642):539-47. doi: 10.1038/41483. Nature. 1997. PMID: 9252185
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.
Klenk HP, Clayton RA, Tomb JF, White O, Nelson KE, Ketchum KA, Dodson RJ, Gwinn M, Hickey EK, Peterson JD, Richardson DL, Kerlavage AR, Graham DE, Kyrpides NC, Fleischmann RD, Quackenbush J, Lee NH, Sutton GG, Gill S, Kirkness EF, Dougherty BA, McKenney K, Adams MD, Loftus B, Peterson S, Reich CI, McNeil LK, Badger JH, Glodek A, Zhou L, Overbeek R, Gocayne JD, Weidman JF, McDonald L, Utterback T, Cotton MD, Spriggs T, Artiach P, Kaine BP, Sykes SM, Sadow PW, D'Andrea KP, Bowman C, Fujii C, Garland SA, Mason TM, Olsen GJ, Fraser CM, Smith HO, Woese CR, Venter JC. Klenk HP, et al. Among authors: quackenbush j. Nature. 1997 Nov 27;390(6658):364-70. doi: 10.1038/37052. Nature. 1997. PMID: 9389475
Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi.
Fraser CM, Casjens S, Huang WM, Sutton GG, Clayton R, Lathigra R, White O, Ketchum KA, Dodson R, Hickey EK, Gwinn M, Dougherty B, Tomb JF, Fleischmann RD, Richardson D, Peterson J, Kerlavage AR, Quackenbush J, Salzberg S, Hanson M, van Vugt R, Palmer N, Adams MD, Gocayne J, Weidman J, Utterback T, Watthey L, McDonald L, Artiach P, Bowman C, Garland S, Fuji C, Cotton MD, Horst K, Roberts K, Hatch B, Smith HO, Venter JC. Fraser CM, et al. Among authors: quackenbush j. Nature. 1997 Dec 11;390(6660):580-6. doi: 10.1038/37551. Nature. 1997. PMID: 9403685
Anchoring of rice BAC clones to the rice genetic map in silico.
Yuan Q, Liang F, Hsiao J, Zismann V, Benito MI, Quackenbush J, Wing R, Buell R. Yuan Q, et al. Among authors: quackenbush j. Nucleic Acids Res. 2000 Sep 15;28(18):3636-41. doi: 10.1093/nar/28.18.3636. Nucleic Acids Res. 2000. PMID: 10982886 Free PMC article.
An optimized protocol for analysis of EST sequences.
Liang F, Holt I, Pertea G, Karamycheva S, Salzberg SL, Quackenbush J. Liang F, et al. Among authors: quackenbush j. Nucleic Acids Res. 2000 Sep 15;28(18):3657-65. doi: 10.1093/nar/28.18.3657. Nucleic Acids Res. 2000. PMID: 10982889 Free PMC article.
A concise guide to cDNA microarray analysis.
Hegde P, Qi R, Abernathy K, Gay C, Dharap S, Gaspard R, Hughes JE, Snesrud E, Lee N, Quackenbush J. Hegde P, et al. Among authors: quackenbush j. Biotechniques. 2000 Sep;29(3):548-50, 552-4, 556 passim. doi: 10.2144/00293bi01. Biotechniques. 2000. PMID: 10997270 Review.
Functional annotation of a full-length mouse cDNA collection.
Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T, Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K, Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W, Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F, Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M, Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N, Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C, Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA, Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J, Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto N, Sasaki H, Sato K, Schönbach C, Seya T, Shibata Y, Storch KF, Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L, Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S, Hayashizaki Y; RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium. Kawai J, et al. Among authors: quackenbush j. Nature. 2001 Feb 8;409(6821):685-90. doi: 10.1038/35055500. Nature. 2001. PMID: 11217851
336 results