R00 GM087550/GM/NIGMS NIH HHS/United States[Grant Number] - Search Results

Year	Number of Results
2009	1
2010	1
2011	4
2012	3
2013	3
2014	7
2015	6
2016	2
2017	2
2018	1
2021	0

1

Tempo and mode of genome evolution in a 50,000-generation experiment.

Tenaillon O, Barrick JE, Ribeck N, Deatherage DE, Blanchard JL, Dasgupta A, Wu GC, Wielgoss S, Cruveiller S, Médigue C, Schneider D, Lenski RE. Tenaillon O, et al. Nature. 2016 Aug 11;536(7615):165-70. doi: 10.1038/nature18959. Epub 2016 Aug 1. Nature. 2016. PMID: 27479321 Free PMC article.

2

Identification of mutations in laboratory-evolved microbes from next-generation sequencing data using breseq.

Deatherage DE, Barrick JE. Deatherage DE, et al. Methods Mol Biol. 2014;1151:165-88. doi: 10.1007/978-1-4939-0554-6_12. Methods Mol Biol. 2014. PMID: 24838886 Free PMC article.

3

Genome dynamics during experimental evolution.

Barrick JE, Lenski RE. Barrick JE, et al. Nat Rev Genet. 2013 Dec;14(12):827-39. doi: 10.1038/nrg3564. Epub 2013 Oct 29. Nat Rev Genet. 2013. PMID: 24166031 Free PMC article. Review.

4

Engineering reduced evolutionary potential for synthetic biology.

Renda BA, Hammerling MJ, Barrick JE. Renda BA, et al. Mol Biosyst. 2014 Jul;10(7):1668-78. doi: 10.1039/c3mb70606k. Epub 2014 Feb 21. Mol Biosyst. 2014. PMID: 24556867 Free PMC article. Review.

5

Innovation in an E. coli evolution experiment is contingent on maintaining adaptive potential until competition subsides.

Leon D, D'Alton S, Quandt EM, Barrick JE. Leon D, et al. PLoS Genet. 2018 Apr 12;14(4):e1007348. doi: 10.1371/journal.pgen.1007348. eCollection 2018 Apr. PLoS Genet. 2018. PMID: 29649242 Free PMC article.

6

Predicting the Genetic Stability of Engineered DNA Sequences with the EFM Calculator.

Jack BR, Leonard SP, Mishler DM, Renda BA, Leon D, Suárez GA, Barrick JE. Jack BR, et al. ACS Synth Biol. 2015 Aug 21;4(8):939-43. doi: 10.1021/acssynbio.5b00068. Epub 2015 Jul 1. ACS Synth Biol. 2015. PMID: 26096262 Free PMC article.

7

Reduced Mutation Rate and Increased Transformability of Transposon-Free Acinetobacter baylyi ADP1-ISx.

Suárez GA, Renda BA, Dasgupta A, Barrick JE. Suárez GA, et al. Appl Environ Microbiol. 2017 Aug 17;83(17):e01025-17. doi: 10.1128/AEM.01025-17. Print 2017 Sep 1. Appl Environ Microbiol. 2017. PMID: 28667117 Free PMC article.

8

Bacteriophages use an expanded genetic code on evolutionary paths to higher fitness.

Hammerling MJ, Ellefson JW, Boutz DR, Marcotte EM, Ellington AD, Barrick JE. Hammerling MJ, et al. Nat Chem Biol. 2014 Mar;10(3):178-80. doi: 10.1038/nchembio.1450. Epub 2014 Feb 2. Nat Chem Biol. 2014. PMID: 24487692 Free PMC article.

9

Specificity of genome evolution in experimental populations of Escherichia coli evolved at different temperatures.

Deatherage DE, Kepner JL, Bennett AF, Lenski RE, Barrick JE. Deatherage DE, et al. Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):E1904-E1912. doi: 10.1073/pnas.1616132114. Epub 2017 Feb 15. Proc Natl Acad Sci U S A. 2017. PMID: 28202733 Free PMC article.

10

Emergence of a Competence-Reducing Filamentous Phage from the Genome of Acinetobacter baylyi ADP1.

Renda BA, Chan C, Parent KN, Barrick JE. Renda BA, et al. J Bacteriol. 2016 Nov 4;198(23):3209-3219. doi: 10.1128/JB.00424-16. Print 2016 Dec 1. J Bacteriol. 2016. PMID: 27645387 Free PMC article.

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