R01 GM022939/GM/NIGMS NIH HHS/United States[Grant Number] - Search Results

Year	Number of Results
1999	1
2002	1
2003	2
2004	2
2005	3
2006	7
2007	3
2008	2
2009	7
2010	8
2011	8
2012	7
2013	5
2014	6
2015	5
2016	4
2017	3
2018	4
2019	2
2022	1

1

Physics-based all-atom modeling of RNA energetics and structure.

Smith LG, Zhao J, Mathews DH, Turner DH. Smith LG, et al. Wiley Interdiscip Rev RNA. 2017 Sep;8(5):10.1002/wrna.1422. doi: 10.1002/wrna.1422. Wiley Interdiscip Rev RNA. 2017. PMID: 28815951 Free PMC article. Review.

2

Fundamental interactions in RNA: Questions answered and remaining.

Turner DH. Turner DH. Biopolymers. 2013 Dec;99(12):1097-104. doi: 10.1002/bip.22294. Biopolymers. 2013. PMID: 23733402 Review.

3

Folding and finding RNA secondary structure.

Mathews DH, Moss WN, Turner DH. Mathews DH, et al. Cold Spring Harb Perspect Biol. 2010 Dec;2(12):a003665. doi: 10.1101/cshperspect.a003665. Epub 2010 Aug 4. Cold Spring Harb Perspect Biol. 2010. PMID: 20685845 Free PMC article. Review.

4

Microarrays for identifying binding sites and probing structure of RNAs.

Kierzek R, Turner DH, Kierzek E. Kierzek R, et al. Nucleic Acids Res. 2015 Jan;43(1):1-12. doi: 10.1093/nar/gku1303. Epub 2014 Dec 12. Nucleic Acids Res. 2015. PMID: 25505162 Free PMC article. Review.

5

RNA secondary structure prediction.

Mathews DH, Turner DH, Zuker M. Mathews DH, et al. Curr Protoc Nucleic Acid Chem. 2007 Mar;Chapter 11:Unit 11.2. doi: 10.1002/0471142700.nc1102s28. Curr Protoc Nucleic Acid Chem. 2007. PMID: 18428968 Free PMC article.

6

Predicting the Kinetics of RNA Oligonucleotides Using Markov State Models.

Pinamonti G, Zhao J, Condon DE, Paul F, Noè F, Turner DH, Bussi G. Pinamonti G, et al. J Chem Theory Comput. 2017 Feb 14;13(2):926-934. doi: 10.1021/acs.jctc.6b00982. Epub 2017 Jan 5. J Chem Theory Comput. 2017. PMID: 28001394 Free PMC article.

7

The R2 retrotransposon RNA families.

Moss WN, Eickbush DG, Lopez MJ, Eickbush TH, Turner DH. Moss WN, et al. RNA Biol. 2011 Sep-Oct;8(5):714-8. doi: 10.4161/rna.8.5.16033. Epub 2011 Jul 7. RNA Biol. 2011. PMID: 21734471 Free PMC article.

8

Conformational ensembles of RNA oligonucleotides from integrating NMR and molecular simulations.

Bottaro S, Bussi G, Kennedy SD, Turner DH, Lindorff-Larsen K. Bottaro S, et al. Sci Adv. 2018 May 18;4(5):eaar8521. doi: 10.1126/sciadv.aar8521. eCollection 2018 May. Sci Adv. 2018. PMID: 29795785 Free PMC article.

9

In vivo analysis of influenza A mRNA secondary structures identifies critical regulatory motifs.

Simon LM, Morandi E, Luganini A, Gribaudo G, Martinez-Sobrido L, Turner DH, Oliviero S, Incarnato D. Simon LM, et al. Nucleic Acids Res. 2019 Jul 26;47(13):7003-7017. doi: 10.1093/nar/gkz318. Nucleic Acids Res. 2019. PMID: 31053845 Free PMC article.

10

Improving RNA nearest neighbor parameters for helices by going beyond the two-state model.

Spasic A, Berger KD, Chen JL, Seetin MG, Turner DH, Mathews DH. Spasic A, et al. Nucleic Acids Res. 2018 Jun 1;46(10):4883-4892. doi: 10.1093/nar/gky270. Nucleic Acids Res. 2018. PMID: 29718397 Free PMC article.

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