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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2004 6
2005 8
2006 6
2007 6
2008 5
2009 10
2011 2
2016 1
2019 1
2020 0
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43 results
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Assessment of CASP11 contact-assisted predictions.
Kinch LN, Li W, Monastyrskyy B, Kryshtafovych A, Grishin NV. Kinch LN, et al. Proteins. 2016 Sep;84 Suppl 1(Suppl 1):164-80. doi: 10.1002/prot.25020. Epub 2016 Mar 9. Proteins. 2016. PMID: 26889875 Free PMC article.
CASP9 target classification.
Kinch LN, Shi S, Cheng H, Cong Q, Pei J, Mariani V, Schwede T, Grishin NV. Kinch LN, et al. Proteins. 2011;79 Suppl 10(Suppl 10):21-36. doi: 10.1002/prot.23190. Epub 2011 Oct 14. Proteins. 2011. PMID: 21997778 Free PMC article.
CASP13 target classification into tertiary structure prediction categories.
Kinch LN, Kryshtafovych A, Monastyrskyy B, Grishin NV. Kinch LN, et al. Proteins. 2019 Dec;87(12):1021-1036. doi: 10.1002/prot.25775. Epub 2019 Jul 24. Proteins. 2019. PMID: 31294862
CASP9 assessment of free modeling target predictions.
Kinch L, Yong Shi S, Cong Q, Cheng H, Liao Y, Grishin NV. Kinch L, et al. Proteins. 2011;79 Suppl 10(Suppl 10):59-73. doi: 10.1002/prot.23181. Epub 2011 Oct 14. Proteins. 2011. PMID: 21997521 Free PMC article.
Analysis of CASP8 targets, predictions and assessment methods.
Shi S, Pei J, Sadreyev RI, Kinch LN, Majumdar I, Tong J, Cheng H, Kim BH, Grishin NV. Shi S, et al. Database (Oxford). 2009;2009:bap003. doi: 10.1093/database/bap003. Epub 2009 Apr 14. Database (Oxford). 2009. PMID: 20157476 Free PMC article.
PROCAIN server for remote protein sequence similarity search.
Wang Y, Sadreyev RI, Grishin NV. Wang Y, et al. Bioinformatics. 2009 Aug 15;25(16):2076-7. doi: 10.1093/bioinformatics/btp346. Epub 2009 Jun 3. Bioinformatics. 2009. PMID: 19497935 Free PMC article.
Structure prediction for CASP8 with all-atom refinement using Rosetta.
Raman S, Vernon R, Thompson J, Tyka M, Sadreyev R, Pei J, Kim D, Kellogg E, DiMaio F, Lange O, Kinch L, Sheffler W, Kim BH, Das R, Grishin NV, Baker D. Raman S, et al. Proteins. 2009;77 Suppl 9(0 9):89-99. doi: 10.1002/prot.22540. Proteins. 2009. PMID: 19701941 Free PMC article.
Reconstruction of ancestral protein sequences and its applications.
Cai W, Pei J, Grishin NV. Cai W, et al. BMC Evol Biol. 2004 Sep 17;4:33. doi: 10.1186/1471-2148-4-33. BMC Evol Biol. 2004. PMID: 15377393 Free PMC article.
Structure similarity measure with penalty for close non-equivalent residues.
Sadreyev RI, Shi S, Baker D, Grishin NV. Sadreyev RI, et al. Bioinformatics. 2009 May 15;25(10):1259-63. doi: 10.1093/bioinformatics/btp148. Epub 2009 Mar 25. Bioinformatics. 2009. PMID: 19321733 Free PMC article.
Remote homology between Munc13 MUN domain and vesicle tethering complexes.
Pei J, Ma C, Rizo J, Grishin NV. Pei J, et al. J Mol Biol. 2009 Aug 21;391(3):509-17. doi: 10.1016/j.jmb.2009.06.054. Epub 2009 Jun 27. J Mol Biol. 2009. PMID: 19563813 Free PMC article.
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