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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2007 1
2008 1
2009 7
2010 1
2020 0
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10 results
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Page 1
TopHat: discovering splice junctions with RNA-Seq.
Trapnell C, Pachter L, Salzberg SL. Trapnell C, et al. Bioinformatics. 2009 May 1;25(9):1105-11. doi: 10.1093/bioinformatics/btp120. Epub 2009 Mar 16. Bioinformatics. 2009. PMID: 19289445 Free PMC article.
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.
Langmead B, Trapnell C, Pop M, Salzberg SL. Langmead B, et al. Genome Biol. 2009;10(3):R25. doi: 10.1186/gb-2009-10-3-r25. Epub 2009 Mar 4. Genome Biol. 2009. PMID: 19261174 Free PMC article.
Insignia: a DNA signature search web server for diagnostic assay development.
Phillippy AM, Ayanbule K, Edwards NJ, Salzberg SL. Phillippy AM, et al. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W229-34. doi: 10.1093/nar/gkp286. Epub 2009 May 5. Nucleic Acids Res. 2009. PMID: 19417071 Free PMC article.
High-throughput sequence alignment using Graphics Processing Units.
Schatz MC, Trapnell C, Delcher AL, Varshney A. Schatz MC, et al. BMC Bioinformatics. 2007 Dec 10;8:474. doi: 10.1186/1471-2105-8-474. BMC Bioinformatics. 2007. PMID: 18070356 Free PMC article.
How to map billions of short reads onto genomes.
Trapnell C, Salzberg SL. Trapnell C, et al. Nat Biotechnol. 2009 May;27(5):455-7. doi: 10.1038/nbt0509-455. Nat Biotechnol. 2009. PMID: 19430453 Free PMC article.
Searching for SNPs with cloud computing.
Langmead B, Schatz MC, Lin J, Pop M, Salzberg SL. Langmead B, et al. Genome Biol. 2009;10(11):R134. doi: 10.1186/gb-2009-10-11-r134. Epub 2009 Nov 20. Genome Biol. 2009. PMID: 19930550 Free PMC article.
Analysis of Carica papaya Telomeres and Telomere-Associated Proteins: Insights into the Evolution of Telomere Maintenance in Brassicales.
Shakirov EV, Salzberg SL, Alam M, Shippen DE. Shakirov EV, et al. Trop Plant Biol. 2008 Dec;1(3-4):202-215. doi: 10.1007/s12042-008-9018-x. Trop Plant Biol. 2008. PMID: 20664721 Free PMC article.
Genome sequence of the dioxin-mineralizing bacterium Sphingomonas wittichii RW1.
Miller TR, Delcher AL, Salzberg SL, Saunders E, Detter JC, Halden RU. Miller TR, et al. J Bacteriol. 2010 Nov;192(22):6101-2. doi: 10.1128/JB.01030-10. Epub 2010 Sep 10. J Bacteriol. 2010. PMID: 20833805 Free PMC article.
Efficient oligonucleotide probe selection for pan-genomic tiling arrays.
Phillippy AM, Deng X, Zhang W, Salzberg SL. Phillippy AM, et al. BMC Bioinformatics. 2009 Sep 16;10:293. doi: 10.1186/1471-2105-10-293. BMC Bioinformatics. 2009. PMID: 19758451 Free PMC article.