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Year Number of Results
2010 1
2011 4
2012 3
2013 6
2014 3
2015 2
2016 1
2017 1
2019 1
2020 0
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18 results
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Page 1
A community-driven global reconstruction of human metabolism.
Thiele I, Swainston N, Fleming RM, Hoppe A, Sahoo S, Aurich MK, Haraldsdottir H, Mo ML, Rolfsson O, Stobbe MD, Thorleifsson SG, Agren R, Bölling C, Bordel S, Chavali AK, Dobson P, Dunn WB, Endler L, Hala D, Hucka M, Hull D, Jameson D, Jamshidi N, Jonsson JJ, Juty N, Keating S, Nookaew I, Le Novère N, Malys N, Mazein A, Papin JA, Price ND, Selkov E Sr, Sigurdsson MI, Simeonidis E, Sonnenschein N, Smallbone K, Sorokin A, van Beek JH, Weichart D, Goryanin I, Nielsen J, Westerhoff HV, Kell DB, Mendes P, Palsson BØ. Thiele I, et al. Nat Biotechnol. 2013 May;31(5):419-25. doi: 10.1038/nbt.2488. Epub 2013 Mar 3. Nat Biotechnol. 2013. PMID: 23455439 Free PMC article.
Multiscale computational models of complex biological systems.
Walpole J, Papin JA, Peirce SM. Walpole J, et al. Annu Rev Biomed Eng. 2013;15:137-54. doi: 10.1146/annurev-bioeng-071811-150104. Epub 2013 Apr 29. Annu Rev Biomed Eng. 2013. PMID: 23642247 Free PMC article. Review.
Integrated Experimental and Computational Analyses Reveal Differential Metabolic Functionality in Antibiotic-Resistant Pseudomonas aeruginosa.
Dunphy LJ, Yen P, Papin JA. Dunphy LJ, et al. Cell Syst. 2019 Jan 23;8(1):3-14.e3. doi: 10.1016/j.cels.2018.12.002. Epub 2019 Jan 2. Cell Syst. 2019. PMID: 30611675 Free PMC article.
Mechanistic systems modeling to guide drug discovery and development.
Schmidt BJ, Papin JA, Musante CJ. Schmidt BJ, et al. Drug Discov Today. 2013 Feb;18(3-4):116-27. doi: 10.1016/j.drudis.2012.09.003. Epub 2012 Sep 19. Drug Discov Today. 2013. PMID: 22999913 Free PMC article. Review.
A metabolic network approach for the identification and prioritization of antimicrobial drug targets.
Chavali AK, D'Auria KM, Hewlett EL, Pearson RD, Papin JA. Chavali AK, et al. Trends Microbiol. 2012 Mar;20(3):113-23. doi: 10.1016/j.tim.2011.12.004. Epub 2012 Jan 31. Trends Microbiol. 2012. PMID: 22300758 Free PMC article. Review.
Reconstruction of the metabolic network of Pseudomonas aeruginosa to interrogate virulence factor synthesis.
Bartell JA, Blazier AS, Yen P, Thøgersen JC, Jelsbak L, Goldberg JB, Papin JA. Bartell JA, et al. Nat Commun. 2017 Mar 7;8:14631. doi: 10.1038/ncomms14631. Nat Commun. 2017. PMID: 28266498 Free PMC article.
Miniaturized plate readers for low-cost, high-throughput phenotypic screening.
Jensen PA, Dougherty BV, Moutinho TJ Jr, Papin JA. Jensen PA, et al. J Lab Autom. 2015 Feb;20(1):51-5. doi: 10.1177/2211068214555414. Epub 2014 Nov 3. J Lab Autom. 2015. PMID: 25366331 Free PMC article.
Systems level analysis of the Chlamydomonas reinhardtii metabolic network reveals variability in evolutionary co-conservation.
Chaiboonchoe A, Ghamsari L, Dohai B, Ng P, Khraiwesh B, Jaiswal A, Jijakli K, Koussa J, Nelson DR, Cai H, Yang X, Chang RL, Papin J, Yu H, Balaji S, Salehi-Ashtiani K. Chaiboonchoe A, et al. Mol Biosyst. 2016 Jul 19;12(8):2394-407. doi: 10.1039/c6mb00237d. Mol Biosyst. 2016. PMID: 27357594
Comparative metabolic systems analysis of pathogenic Burkholderia.
Bartell JA, Yen P, Varga JJ, Goldberg JB, Papin JA. Bartell JA, et al. J Bacteriol. 2014 Jan;196(2):210-26. doi: 10.1128/JB.00997-13. Epub 2013 Oct 25. J Bacteriol. 2014. PMID: 24163337 Free PMC article.
Novel multiscale modeling tool applied to Pseudomonas aeruginosa biofilm formation.
Biggs MB, Papin JA. Biggs MB, et al. PLoS One. 2013 Oct 17;8(10):e78011. doi: 10.1371/journal.pone.0078011. eCollection 2013. PLoS One. 2013. PMID: 24147108 Free PMC article.
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