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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2006 1
2007 1
2008 3
2009 3
2010 3
2011 7
2012 4
2013 1
2014 2
2015 1
2021 0
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25 results
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Page 1
MEME SUITE: tools for motif discovery and searching.
Bailey TL, Boden M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS. Bailey TL, et al. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W202-8. doi: 10.1093/nar/gkp335. Epub 2009 May 20. Nucleic Acids Res. 2009. PMID: 19458158 Free PMC article.
FIMO: scanning for occurrences of a given motif.
Grant CE, Bailey TL, Noble WS. Grant CE, et al. Bioinformatics. 2011 Apr 1;27(7):1017-8. doi: 10.1093/bioinformatics/btr064. Epub 2011 Feb 16. Bioinformatics. 2011. PMID: 21330290 Free PMC article.
Practical guidelines for the comprehensive analysis of ChIP-seq data.
Bailey T, Krajewski P, Ladunga I, Lefebvre C, Li Q, Liu T, Madrigal P, Taslim C, Zhang J. Bailey T, et al. PLoS Comput Biol. 2013;9(11):e1003326. doi: 10.1371/journal.pcbi.1003326. Epub 2013 Nov 14. PLoS Comput Biol. 2013. PMID: 24244136 Free PMC article.
MEME-ChIP: motif analysis of large DNA datasets.
Machanick P, Bailey TL. Machanick P, et al. Bioinformatics. 2011 Jun 15;27(12):1696-7. doi: 10.1093/bioinformatics/btr189. Epub 2011 Apr 12. Bioinformatics. 2011. PMID: 21486936 Free PMC article.
GT-Scan: identifying unique genomic targets.
O'Brien A, Bailey TL. O'Brien A, et al. Bioinformatics. 2014 Sep 15;30(18):2673-5. doi: 10.1093/bioinformatics/btu354. Epub 2014 May 23. Bioinformatics. 2014. PMID: 24860161 Free PMC article.
Tissue-specific prediction of directly regulated genes.
McLeay RC, Leat CJ, Bailey TL. McLeay RC, et al. Bioinformatics. 2011 Sep 1;27(17):2354-60. doi: 10.1093/bioinformatics/btr399. Epub 2011 Jun 30. Bioinformatics. 2011. PMID: 21724591 Free PMC article.
Improved similarity scores for comparing motifs.
Tanaka E, Bailey T, Grant CE, Noble WS, Keich U. Tanaka E, et al. Bioinformatics. 2011 Jun 15;27(12):1603-9. doi: 10.1093/bioinformatics/btr257. Epub 2011 May 4. Bioinformatics. 2011. PMID: 21543443 Free PMC article.
Inferring transcription factor complexes from ChIP-seq data.
Whitington T, Frith MC, Johnson J, Bailey TL. Whitington T, et al. Nucleic Acids Res. 2011 Aug;39(15):e98. doi: 10.1093/nar/gkr341. Epub 2011 May 20. Nucleic Acids Res. 2011. PMID: 21602262 Free PMC article.
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