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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2013 2
2014 2
2015 2
2016 1
2017 1
2018 3
2019 1
2020 1
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12 results
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Small RNA profiling in Mycobacterium tuberculosis identifies MrsI as necessary for an anticipatory iron sparing response.
Gerrick ER, Barbier T, Chase MR, Xu R, Fran├žois J, Lin VH, Szucs MJ, Rock JM, Ahmad R, Tjaden B, Livny J, Fortune SM. Gerrick ER, et al. Proc Natl Acad Sci U S A. 2018 Jun 19;115(25):6464-6469. doi: 10.1073/pnas.1718003115. Epub 2018 Jun 5. Proc Natl Acad Sci U S A. 2018. PMID: 29871950 Free PMC article.
Computational analysis of bacterial RNA-Seq data.
McClure R, Balasubramanian D, Sun Y, Bobrovskyy M, Sumby P, Genco CA, Vanderpool CK, Tjaden B. McClure R, et al. Nucleic Acids Res. 2013 Aug;41(14):e140. doi: 10.1093/nar/gkt444. Epub 2013 May 28. Nucleic Acids Res. 2013. PMID: 23716638 Free PMC article.
Transcriptome Analysis of Neisseria gonorrhoeae during Natural Infection Reveals Differential Expression of Antibiotic Resistance Determinants between Men and Women.
Nudel K, McClure R, Moreau M, Briars E, Abrams AJ, Tjaden B, Su XH, Trees D, Rice PA, Massari P, Genco CA. Nudel K, et al. mSphere. 2018 Jun 27;3(3):e00312-18. doi: 10.1128/mSphereDirect.00312-18. Print 2018 Aug 29. mSphere. 2018. PMID: 29950382 Free PMC article.
A computational system for identifying operons based on RNA-seq data.
Tjaden B. Tjaden B. Methods. 2020 Apr 1;176:62-70. doi: 10.1016/j.ymeth.2019.03.026. Epub 2019 Apr 4. Methods. 2020. PMID: 30953757 Free article. Review.
Identification and Characterization of Serotype-Specific Variation in Group A Streptococcus Pilus Expression.
Calfee G, Danger JL, Jain I, Miller EW, Sarkar P, Tjaden B, Kreikemeyer B, Sumby P. Calfee G, et al. Infect Immun. 2018 Jan 22;86(2):e00792-17. doi: 10.1128/IAI.00792-17. Print 2018 Feb. Infect Immun. 2018. PMID: 29158432 Free PMC article.
De novo assembly of bacterial transcriptomes from RNA-seq data.
Tjaden B. Tjaden B. Genome Biol. 2015 Jan 13;16(1):1. doi: 10.1186/s13059-014-0572-2. Genome Biol. 2015. PMID: 25583448 Free PMC article.
TargetRNA2: identifying targets of small regulatory RNAs in bacteria.
Kery MB, Feldman M, Livny J, Tjaden B. Kery MB, et al. Nucleic Acids Res. 2014 Jul;42(Web Server issue):W124-9. doi: 10.1093/nar/gku317. Epub 2014 Apr 21. Nucleic Acids Res. 2014. PMID: 24753424 Free PMC article.
Probing the sRNA regulatory landscape of P. aeruginosa: post-transcriptional control of determinants of pathogenicity and antibiotic susceptibility.
Zhang YF, Han K, Chandler CE, Tjaden B, Ernst RK, Lory S. Zhang YF, et al. Mol Microbiol. 2017 Dec;106(6):919-937. doi: 10.1111/mmi.13857. Epub 2017 Nov 2. Mol Microbiol. 2017. PMID: 28976035 Free PMC article.
The Gonococcal Transcriptome during Infection of the Lower Genital Tract in Women.
McClure R, Nudel K, Massari P, Tjaden B, Su X, Rice PA, Genco CA. McClure R, et al. PLoS One. 2015 Aug 5;10(8):e0133982. doi: 10.1371/journal.pone.0133982. eCollection 2015. PLoS One. 2015. PMID: 26244506 Free PMC article.
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