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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1981 1
1987 2
1988 4
1989 2
1990 5
1991 9
1992 13
1993 6
1994 14
1995 13
1996 9
1997 7
1998 14
1999 5
2000 16
2001 11
2002 6
2003 13
2004 8
2005 27
2006 16
2007 20
2008 23
2009 59
2010 221
2011 464
2012 772
2013 1319
2014 2642
2015 3273
2016 4455
2017 4084
2018 4694
2019 6293
2020 8276
2021 10251
2022 9296
2023 36
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50,585 results
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Page 1
RNA-seq in Skeletal Biology.
Ayturk U. Ayturk U. Curr Osteoporos Rep. 2019 Aug;17(4):178-185. doi: 10.1007/s11914-019-00517-x. Curr Osteoporos Rep. 2019. PMID: 31093870 Review.
RNA-seq has led to the identification of novel genes and transcription factors involved in skeletal development and disease, through its application in small and large animal models, as well as human tissue and cells. With the availability of advanced techniques suc
RNA-seq has led to the identification of novel genes and transcription factors involved in skeletal development and disease, t
An RNA-Seq Protocol for Differential Expression Analysis.
Owens NDL, De Domenico E, Gilchrist MJ. Owens NDL, et al. Cold Spring Harb Protoc. 2019 Jun 3;2019(6). doi: 10.1101/pdb.prot098368. Cold Spring Harb Protoc. 2019. PMID: 30952685
Here we consider RNA-Seq, used to measure global gene expression through RNA fragmentation, capture, sequencing, and subsequent computational analysis. ...Here we present a standard RNA-Seq protocol for performing two-state differential gene exp …
Here we consider RNA-Seq, used to measure global gene expression through RNA fragmentation, capture, sequencing, and su …
Cross-species RNA-seq for deciphering host-microbe interactions.
Westermann AJ, Vogel J. Westermann AJ, et al. Nat Rev Genet. 2021 Jun;22(6):361-378. doi: 10.1038/s41576-021-00326-y. Epub 2021 Feb 17. Nat Rev Genet. 2021. PMID: 33597744 Review.
The cellular states of the interacting cells are decisive for the outcome of these encounters such as whether bacterial virulence programmes and host defence or tolerance mechanisms are induced. This Review summarizes how next-generation RNA sequencing (RNA-seq
The cellular states of the interacting cells are decisive for the outcome of these encounters such as whether bacterial virulence programmes …
Current RNA-seq methodology reporting limits reproducibility.
Simoneau J, Dumontier S, Gosselin R, Scott MS. Simoneau J, et al. Brief Bioinform. 2021 Jan 18;22(1):140-145. doi: 10.1093/bib/bbz124. Brief Bioinform. 2021. PMID: 31813948 Free PMC article. Review.
Ribonucleic acid sequencing (RNA-seq) identifies and quantifies RNA molecules from a biological sample. ...This work illustrates the need for a standardized and explicit display of methodological information in RNA-seq experiments....
Ribonucleic acid sequencing (RNA-seq) identifies and quantifies RNA molecules from a biological sample. ...This work il …
Single-nuclei RNA-seq on human retinal tissue provides improved transcriptome profiling.
Liang Q, Dharmat R, Owen L, Shakoor A, Li Y, Kim S, Vitale A, Kim I, Morgan D, Liang S, Wu N, Chen K, DeAngelis MM, Chen R. Liang Q, et al. Nat Commun. 2019 Dec 17;10(1):5743. doi: 10.1038/s41467-019-12917-9. Nat Commun. 2019. PMID: 31848347 Free PMC article.
Here, we report a single-nuclei RNA-seq (snRNA-seq) transcriptomic study on human retinal tissue, which is composed of multiple cell types with distinct functions. ...Furthermore, our dataset shows an improved power for prioritizing genes associated with huma …
Here, we report a single-nuclei RNA-seq (snRNA-seq) transcriptomic study on human retinal tissue, which is composed of …
Processing and Analysis of RNA-seq Data from Public Resources.
Zoabi Y, Shomron N. Zoabi Y, et al. Methods Mol Biol. 2021;2243:81-94. doi: 10.1007/978-1-0716-1103-6_4. Methods Mol Biol. 2021. PMID: 33606253 Review.
Advances in next generation sequencing (NGS) technologies resulted in a broad array of large-scale gene expression studies and an unprecedented volume of whole messenger RNA (mRNA) sequencing data, or the transcriptome (also known as RNA sequencing, or RNA- …
Advances in next generation sequencing (NGS) technologies resulted in a broad array of large-scale gene expression studies and an unpreceden …
Evaluation of tools for highly variable gene discovery from single-cell RNA-seq data.
Yip SH, Sham PC, Wang J. Yip SH, et al. Brief Bioinform. 2019 Jul 19;20(4):1583-1589. doi: 10.1093/bib/bby011. Brief Bioinform. 2019. PMID: 29481632 Free PMC article. Review.
However, genes that contribute to cell-to-cell differences are not discoverable with RNA-seq because RNA-seq samples are obtained from a mixture of cells. Single-cell RNA-seq (scRNA-seq) allows the detection of gene expression in e …
However, genes that contribute to cell-to-cell differences are not discoverable with RNA-seq because RNA-seq sam …
Dual RNA-Seq of Mtb-Infected Macrophages In Vivo Reveals Ontologically Distinct Host-Pathogen Interactions.
Pisu D, Huang L, Grenier JK, Russell DG. Pisu D, et al. Cell Rep. 2020 Jan 14;30(2):335-350.e4. doi: 10.1016/j.celrep.2019.12.033. Cell Rep. 2020. PMID: 31940480 Free PMC article.
In this work, we explore the in vivo molecular dynamics of Mtb infection by performing dual RNA-seq on Mycobacterium tuberculosis-infected, ontogenetically distinct macrophage lineages isolated directly from murine lungs. ...
In this work, we explore the in vivo molecular dynamics of Mtb infection by performing dual RNA-seq on Mycobacterium tuberculo …
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq.
Song Q, Hawkins GA, Wudel L, Chou PC, Forbes E, Pullikuth AK, Liu L, Jin G, Craddock L, Topaloglu U, Kucera G, O'Neill S, Levine EA, Sun P, Watabe K, Lu Y, Alexander-Miller MA, Pasche B, Miller LD, Zhang W. Song Q, et al. Cancer Med. 2019 Jun;8(6):3072-3085. doi: 10.1002/cam4.2113. Epub 2019 Apr 29. Cancer Med. 2019. PMID: 31033233 Free PMC article.
However, the in situ dynamics of the transcriptional reprogramming underlying this process are poorly understood. Therefore, we applied single cell RNA-seq (scRNA-seq) to computationally investigate the cellular composition and transcriptional dynamics of tum …
However, the in situ dynamics of the transcriptional reprogramming underlying this process are poorly understood. Therefore, we applied sing …
Bias in RNA-seq Library Preparation: Current Challenges and Solutions.
Shi H, Zhou Y, Jia E, Pan M, Bai Y, Ge Q. Shi H, et al. Biomed Res Int. 2021 Apr 19;2021:6647597. doi: 10.1155/2021/6647597. eCollection 2021. Biomed Res Int. 2021. PMID: 33987443 Free PMC article. Review.
Although RNA sequencing (RNA-seq) has become the most advanced technology for transcriptome analysis, it also confronts various challenges. As we all know, the workflow of RNA-seq is extremely complicated and it is easy to produce bias. ...
Although RNA sequencing (RNA-seq) has become the most advanced technology for transcriptome analysis, it also confronts …
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