Ragan MA - Search Results

1

Scaling Up the Phylogenetic Detection of Lateral Gene Transfer Events.

Chan CX, Beiko RG, Ragan MA. Chan CX, et al. Among authors: ragan ma. Methods Mol Biol. 2017;1525:421-432. doi: 10.1007/978-1-4939-6622-6_16. Methods Mol Biol. 2017. PMID: 27896730

2

Matrix representation in reconstructing phylogenetic relationships among the eukaryotes.

Ragan MA. Ragan MA. Biosystems. 1992;28(1-3):47-55. doi: 10.1016/0303-2647(92)90007-l. Biosystems. 1992. PMID: 1292666

3

Phylogenetic inference based on matrix representation of trees.

Ragan MA. Ragan MA. Mol Phylogenet Evol. 1992 Mar;1(1):53-8. doi: 10.1016/1055-7903(92)90035-f. Mol Phylogenet Evol. 1992. PMID: 1342924

4

Ribosomal RNA and the major lines of evolution: a perspective.

Ragan MA. Ragan MA. Biosystems. 1988;21(3-4):177-87. doi: 10.1016/0303-2647(88)90011-1. Biosystems. 1988. PMID: 3293666 Review.

5

Characterization of the nuclear gene encoding mitochondrial aconitase in the marine red alga Gracilaria verrucosa.

Zhou YH, Ragan MA. Zhou YH, et al. Among authors: ragan ma. Plant Mol Biol. 1995 Jul;28(4):635-46. doi: 10.1007/BF00021189. Plant Mol Biol. 1995. PMID: 7647296

6

On surrogate methods for detecting lateral gene transfer.

Ragan MA. Ragan MA. FEMS Microbiol Lett. 2001 Jul 24;201(2):187-91. doi: 10.1111/j.1574-6968.2001.tb10755.x. FEMS Microbiol Lett. 2001. PMID: 11470360

7

Detection of lateral gene transfer among microbial genomes.

Ragan MA. Ragan MA. Curr Opin Genet Dev. 2001 Dec;11(6):620-6. doi: 10.1016/s0959-437x(00)00244-6. Curr Opin Genet Dev. 2001. PMID: 11682304 Review.

8

Distributional profiles of homologous open reading frames among bacterial phyla: implications for vertical and lateral transmission.

Ragan MA, Charlebois RL. Ragan MA, et al. Int J Syst Evol Microbiol. 2002 May;52(Pt 3):777-787. doi: 10.1099/00207713-52-3-777. Int J Syst Evol Microbiol. 2002. PMID: 12054238

9

Are Ichthyosporea animals or fungi? Bayesian phylogenetic analysis of elongation factor 1alpha of Ichthyophonus irregularis.

Ragan MA, Murphy CA, Rand TG. Ragan MA, et al. Mol Phylogenet Evol. 2003 Dec;29(3):550-62. doi: 10.1016/s1055-7903(03)00134-9. Mol Phylogenet Evol. 2003. PMID: 14615193

10

A hybrid clustering approach to recognition of protein families in 114 microbial genomes.

Harlow TJ, Gogarten JP, Ragan MA. Harlow TJ, et al. Among authors: ragan ma. BMC Bioinformatics. 2004 Apr 29;5:45. doi: 10.1186/1471-2105-5-45. BMC Bioinformatics. 2004. PMID: 15115543 Free PMC article.

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