Rainey PB - Search Results

1

Within-genome evolution of REPINs: a new family of miniature mobile DNA in bacteria.

Bertels F, Rainey PB. Bertels F, et al. Among authors: rainey pb. PLoS Genet. 2011 Jun;7(6):e1002132. doi: 10.1371/journal.pgen.1002132. Epub 2011 Jun 16. PLoS Genet. 2011. PMID: 21698139 Free PMC article.

2

Genetic analysis of the histidine utilization (hut) genes in Pseudomonas fluorescens SBW25.

Zhang XX, Rainey PB. Zhang XX, et al. Among authors: rainey pb. Genetics. 2007 Aug;176(4):2165-76. doi: 10.1534/genetics.107.075713. Genetics. 2007. PMID: 17717196 Free PMC article.

3

Curiosities of REPINs and RAYTs.

Bertels F, Rainey PB. Bertels F, et al. Among authors: rainey pb. Mob Genet Elements. 2011 Nov 1;1(4):262-268. doi: 10.4161/mge.18610. Mob Genet Elements. 2011. PMID: 22545236 Free PMC article.

4

Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease.

McCann HC, Rikkerink EH, Bertels F, Fiers M, Lu A, Rees-George J, Andersen MT, Gleave AP, Haubold B, Wohlers MW, Guttman DS, Wang PW, Straub C, Vanneste JL, Rainey PB, Templeton MD. McCann HC, et al. Among authors: rainey pb. PLoS Pathog. 2013;9(7):e1003503. doi: 10.1371/journal.ppat.1003503. Epub 2013 Jul 25. PLoS Pathog. 2013. PMID: 23935484 Free PMC article.

5

Adaptive divergence in experimental populations of Pseudomonas fluorescens. V. Insight into the niche specialist fuzzy spreader compels revision of the model Pseudomonas radiation.

Ferguson GC, Bertels F, Rainey PB. Ferguson GC, et al. Among authors: rainey pb. Genetics. 2013 Dec;195(4):1319-35. doi: 10.1534/genetics.113.154948. Epub 2013 Sep 27. Genetics. 2013. PMID: 24077305 Free PMC article.

6

Automated reconstruction of whole-genome phylogenies from short-sequence reads.

Bertels F, Silander OK, Pachkov M, Rainey PB, van Nimwegen E. Bertels F, et al. Among authors: rainey pb. Mol Biol Evol. 2014 May;31(5):1077-88. doi: 10.1093/molbev/msu088. Epub 2014 Mar 5. Mol Biol Evol. 2014. PMID: 24600054 Free PMC article.

7

Bistability in a metabolic network underpins the de novo evolution of colony switching in Pseudomonas fluorescens.

Gallie J, Libby E, Bertels F, Remigi P, Jendresen CB, Ferguson GC, Desprat N, Buffing MF, Sauer U, Beaumont HJ, Martinussen J, Kilstrup M, Rainey PB. Gallie J, et al. Among authors: rainey pb. PLoS Biol. 2015 Mar 12;13(3):e1002109. doi: 10.1371/journal.pbio.1002109. eCollection 2015 Mar. PLoS Biol. 2015. PMID: 25763575 Free PMC article.

8

Anaerobically Grown Escherichia coli Has an Enhanced Mutation Rate and Distinct Mutational Spectra.

Shewaramani S, Finn TJ, Leahy SC, Kassen R, Rainey PB, Moon CD. Shewaramani S, et al. Among authors: rainey pb. PLoS Genet. 2017 Jan 19;13(1):e1006570. doi: 10.1371/journal.pgen.1006570. eCollection 2017 Jan. PLoS Genet. 2017. PMID: 28103245 Free PMC article.

9

Identification and Characterization of Domesticated Bacterial Transposases.

Bertels F, Gallie J, Rainey PB. Bertels F, et al. Among authors: rainey pb. Genome Biol Evol. 2017 Aug 1;9(8):2110-2121. doi: 10.1093/gbe/evx146. Genome Biol Evol. 2017. PMID: 28910967 Free PMC article.

10

Repeated Phenotypic Evolution by Different Genetic Routes in Pseudomonas fluorescens SBW25.

Gallie J, Bertels F, Remigi P, Ferguson GC, Nestmann S, Rainey PB. Gallie J, et al. Among authors: rainey pb. Mol Biol Evol. 2019 May 1;36(5):1071-1085. doi: 10.1093/molbev/msz040. Mol Biol Evol. 2019. PMID: 30835268 Free PMC article.

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