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Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data.
Joensen KG, Tetzschner AM, Iguchi A, Aarestrup FM, Scheutz F. Joensen KG, et al. J Clin Microbiol. 2015 Aug;53(8):2410-26. doi: 10.1128/JCM.00008-15. Epub 2015 May 13. J Clin Microbiol. 2015. PMID: 25972421 Free PMC article.
With whole-genome sequencing (WGS) becoming cheaper, it has vast potential in routine typing and surveillance. The aim of this study was to establish a valid and publicly available tool for WGS-based in silico serotyping of E. coli applic …
With whole-genome sequencing (WGS) becoming cheaper, it has vast potential in routine typing and surveillance. The aim …
Implementation of Whole Genome Sequencing (WGS) for Identification and Characterization of Shiga Toxin-Producing Escherichia coli (STEC) in the United States.
Lindsey RL, Pouseele H, Chen JC, Strockbine NA, Carleton HA. Lindsey RL, et al. Front Microbiol. 2016 May 23;7:766. doi: 10.3389/fmicb.2016.00766. eCollection 2016. Front Microbiol. 2016. PMID: 27242777 Free PMC article.
Shiga toxin-producing Escherichia coli (STEC) is an important foodborne pathogen capable of causing severe disease in humans. ...With the advent of rapid and cheap whole genome sequencing (WGS) benchtop sequencers, the potential exists to …
Shiga toxin-producing Escherichia coli (STEC) is an important foodborne pathogen capable of causing severe disease in humans. …
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