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247 results
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Data-based filtering for replicated high-throughput transcriptome sequencing experiments.
Rau A, Gallopin M, Celeux G, Jaffrézic F. Rau A, et al. Bioinformatics. 2013 Sep 1;29(17):2146-52. doi: 10.1093/bioinformatics/btt350. Epub 2013 Jul 2. Bioinformatics. 2013. PMID: 23821648 Free PMC article.
Transcriptome profiling of the honeybee parasite Varroa destructor provides new biological insights into the mite adult life cycle.
Mondet F, Rau A, Klopp C, Rohmer M, Severac D, Le Conte Y, Alaux C. Mondet F, et al. Among authors: rau a. BMC Genomics. 2018 May 4;19(1):328. doi: 10.1186/s12864-018-4668-z. BMC Genomics. 2018. PMID: 29728057 Free PMC article.
Impact of the genetic background on the composition of the chicken plasma MiRNome in response to a stress.
Ahanda ML, Zerjal T, Dhorne-Pollet S, Rau A, Cooksey A, Giuffra E. Ahanda ML, et al. Among authors: rau a. PLoS One. 2014 Dec 4;9(12):e114598. doi: 10.1371/journal.pone.0114598. eCollection 2014. PLoS One. 2014. PMID: 25473826 Free PMC article.
Contribution of mammary epithelial cells to the immune response during early stages of a bacterial infection to Staphylococcus aureus.
Brenaut P, Lefèvre L, Rau A, Laloë D, Pisoni G, Moroni P, Bevilacqua C, Martin P. Brenaut P, et al. Among authors: rau a. Vet Res. 2014 Feb 12;45(1):16. doi: 10.1186/1297-9716-45-16. Vet Res. 2014. PMID: 24521038 Free PMC article.
Differential meta-analysis of RNA-seq data from multiple studies.
Rau A, Marot G, Jaffrézic F. Rau A, et al. BMC Bioinformatics. 2014 Mar 29;15:91. doi: 10.1186/1471-2105-15-91. BMC Bioinformatics. 2014. PMID: 24678608 Free PMC article.
Exploring drivers of gene expression in the Cancer Genome Atlas.
Rau A, Flister M, Rui H, Auer PL. Rau A, et al. Bioinformatics. 2019 Jan 1;35(1):62-68. doi: 10.1093/bioinformatics/bty551. Bioinformatics. 2019. PMID: 30561551 Free PMC article.
Compositional Bias in Naïve and Chemically-modified Phage-Displayed Libraries uncovered by Paired-end Deep Sequencing.
He B, Tjhung KF, Bennett NJ, Chou Y, Rau A, Huang J, Derda R. He B, et al. Among authors: rau a. Sci Rep. 2018 Jan 19;8(1):1214. doi: 10.1038/s41598-018-19439-2. Sci Rep. 2018. PMID: 29352178 Free PMC article.
Genetic and transcriptomic analyses provide new insights on the early antiviral response to VHSV in resistant and susceptible rainbow trout.
Verrier ER, Genet C, Laloë D, Jaffrezic F, Rau A, Esquerre D, Dechamp N, Ciobotaru C, Hervet C, Krieg F, Jouneau L, Klopp C, Quillet E, Boudinot P. Verrier ER, et al. Among authors: rau a. BMC Genomics. 2018 Jun 19;19(1):482. doi: 10.1186/s12864-018-4860-1. BMC Genomics. 2018. PMID: 29921219 Free PMC article.
Transformation and model choice for RNA-seq co-expression analysis.
Rau A, Maugis-Rabusseau C. Rau A, et al. Brief Bioinform. 2018 May 1;19(3):425-436. doi: 10.1093/bib/bbw128. Brief Bioinform. 2018. PMID: 28065917
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis.
Rigaill G, Balzergue S, Brunaud V, Blondet E, Rau A, Rogier O, Caius J, Maugis-Rabusseau C, Soubigou-Taconnat L, Aubourg S, Lurin C, Martin-Magniette ML, Delannoy E. Rigaill G, et al. Among authors: rau a. Brief Bioinform. 2018 Jan 1;19(1):65-76. doi: 10.1093/bib/bbw092. Brief Bioinform. 2018. PMID: 27742662
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