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Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States.
Cramer EY, Ray EL, Lopez VK, Bracher J, Brennen A, Castro Rivadeneira AJ, Gerding A, Gneiting T, House KH, Huang Y, Jayawardena D, Kanji AH, Khandelwal A, Le K, Mühlemann A, Niemi J, Shah A, Stark A, Wang Y, Wattanachit N, Zorn MW, Gu Y, Jain S, Bannur N, Deva A, Kulkarni M, Merugu S, Raval A, Shingi S, Tiwari A, White J, Abernethy NF, Woody S, Dahan M, Fox S, Gaither K, Lachmann M, Meyers LA, Scott JG, Tec M, Srivastava A, George GE, Cegan JC, Dettwiller ID, England WP, Farthing MW, Hunter RH, Lafferty B, Linkov I, Mayo ML, Parno MD, Rowland MA, Trump BD, Zhang-James Y, Chen S, Faraone SV, Hess J, Morley CP, Salekin A, Wang D, Corsetti SM, Baer TM, Eisenberg MC, Falb K, Huang Y, Martin ET, McCauley E, Myers RL, Schwarz T, Sheldon D, Gibson GC, Yu R, Gao L, Ma Y, Wu D, Yan X, Jin X, Wang YX, Chen Y, Guo L, Zhao Y, Gu Q, Chen J, Wang L, Xu P, Zhang W, Zou D, Biegel H, Lega J, McConnell S, Nagraj VP, Guertin SL, Hulme-Lowe C, Turner SD, Shi Y, Ban X, Walraven R, Hong QJ, Kong S, van de Walle A, Turtle JA, Ben-Nun M, Riley S, Riley P, Koyluoglu U, DesRoches D, Forli P, Hamory B, Kyriakides C, Leis H, Milliken J, Moloney M, Morgan J, Nirgudkar N, Ozcan G, Piwonka N, Ravi M, Sch… See abstract for full author list ➔ Cramer EY, et al. Among authors: raval a. Proc Natl Acad Sci U S A. 2022 Apr 12;119(15):e2113561119. doi: 10.1073/pnas.2113561119. Epub 2022 Apr 8. Proc Natl Acad Sci U S A. 2022. PMID: 35394862 Free PMC article.
The United States COVID-19 Forecast Hub dataset.
Cramer EY, Huang Y, Wang Y, Ray EL, Cornell M, Bracher J, Brennen A, Rivadeneira AJC, Gerding A, House K, Jayawardena D, Kanji AH, Khandelwal A, Le K, Mody V, Mody V, Niemi J, Stark A, Shah A, Wattanchit N, Zorn MW, Reich NG; US COVID-19 Forecast Hub Consortium. Cramer EY, et al. Sci Data. 2022 Aug 1;9(1):462. doi: 10.1038/s41597-022-01517-w. Sci Data. 2022. PMID: 35915104 Free PMC article.
Computational modeling in systems biology.
Vallabhajosyula RR, Raval A. Vallabhajosyula RR, et al. Among authors: raval a. Methods Mol Biol. 2010;662:97-120. doi: 10.1007/978-1-60761-800-3_5. Methods Mol Biol. 2010. PMID: 20824468 Review.
Identifying hubs in protein interaction networks.
Vallabhajosyula RR, Chakravarti D, Lutfeali S, Ray A, Raval A. Vallabhajosyula RR, et al. Among authors: raval a. PLoS One. 2009;4(4):e5344. doi: 10.1371/journal.pone.0005344. Epub 2009 Apr 28. PLoS One. 2009. PMID: 19399170 Free PMC article.
Detection of genomic islands via segmental genome heterogeneity.
Arvey AJ, Azad RK, Raval A, Lawrence JG. Arvey AJ, et al. Among authors: raval a. Nucleic Acids Res. 2009 Sep;37(16):5255-66. doi: 10.1093/nar/gkp576. Epub 2009 Jul 9. Nucleic Acids Res. 2009. PMID: 19589805 Free PMC article.
Mining protein networks for synthetic genetic interactions.
Paladugu SR, Zhao S, Ray A, Raval A. Paladugu SR, et al. Among authors: raval a. BMC Bioinformatics. 2008 Oct 9;9:426. doi: 10.1186/1471-2105-9-426. BMC Bioinformatics. 2008. PMID: 18844977 Free PMC article.
A genome wide dosage suppressor network reveals genomic robustness.
Patra B, Kon Y, Yadav G, Sevold AW, Frumkin JP, Vallabhajosyula RR, Hintze A, Østman B, Schossau J, Bhan A, Marzolf B, Tamashiro JK, Kaur A, Baliga NS, Grayhack EJ, Adami C, Galas DJ, Raval A, Phizicky EM, Ray A. Patra B, et al. Among authors: raval a. Nucleic Acids Res. 2017 Jan 9;45(1):255-270. doi: 10.1093/nar/gkw1148. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27899637 Free PMC article.
412 results