Ray D - Search Results

1

A compendium of RNA-binding motifs for decoding gene regulation.

Ray D, Kazan H, Cook KB, Weirauch MT, Najafabadi HS, Li X, Gueroussov S, Albu M, Zheng H, Yang A, Na H, Irimia M, Matzat LH, Dale RK, Smith SA, Yarosh CA, Kelly SM, Nabet B, Mecenas D, Li W, Laishram RS, Qiao M, Lipshitz HD, Piano F, Corbett AH, Carstens RP, Frey BJ, Anderson RA, Lynch KW, Penalva LO, Lei EP, Fraser AG, Blencowe BJ, Morris QD, Hughes TR. Ray D, et al. Nature. 2013 Jul 11;499(7457):172-7. doi: 10.1038/nature12311. Nature. 2013. PMID: 23846655 Free PMC article.

2

3'-Terminal RNA secondary structures are important for accumulation of tomato bushy stunt virus DI RNAs.

Fabian MR, Na H, Ray D, White KA. Fabian MR, et al. Among authors: ray d. Virology. 2003 Sep 1;313(2):567-80. doi: 10.1016/s0042-6822(03)00349-0. Virology. 2003. PMID: 12954222 Free article.

3

Structural properties of a multifunctional T-shaped RNA domain that mediate efficient tomato bushy stunt virus RNA replication.

Ray D, Na H, White KA. Ray D, et al. J Virol. 2004 Oct;78(19):10490-500. doi: 10.1128/JVI.78.19.10490-10500.2004. J Virol. 2004. PMID: 15367615 Free PMC article.

4

The p92 polymerase coding region contains an internal RNA element required at an early step in Tombusvirus genome replication.

Monkewich S, Lin HX, Fabian MR, Xu W, Na H, Ray D, Chernysheva OA, Nagy PD, White KA. Monkewich S, et al. Among authors: ray d. J Virol. 2005 Apr;79(8):4848-58. doi: 10.1128/JVI.79.8.4848-4858.2005. J Virol. 2005. PMID: 15795270 Free PMC article.

5

Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins.

Ray D, Kazan H, Chan ET, Peña Castillo L, Chaudhry S, Talukder S, Blencowe BJ, Morris Q, Hughes TR. Ray D, et al. Nat Biotechnol. 2009 Jul;27(7):667-70. doi: 10.1038/nbt.1550. Epub 2009 Jun 28. Nat Biotechnol. 2009. PMID: 19561594

6

RNAcontext: a new method for learning the sequence and structure binding preferences of RNA-binding proteins.

Kazan H, Ray D, Chan ET, Hughes TR, Morris Q. Kazan H, et al. Among authors: ray d. PLoS Comput Biol. 2010 Jul 1;6(7):e1000832. doi: 10.1371/journal.pcbi.1000832. PLoS Comput Biol. 2010. PMID: 20617199 Free PMC article.

7

Cross-regulation between an alternative splicing activator and a transcription repressor controls neurogenesis.

Raj B, O'Hanlon D, Vessey JP, Pan Q, Ray D, Buckley NJ, Miller FD, Blencowe BJ. Raj B, et al. Among authors: ray d. Mol Cell. 2011 Sep 2;43(5):843-50. doi: 10.1016/j.molcel.2011.08.014. Mol Cell. 2011. PMID: 21884984 Free article.

8

Paralogs hnRNP L and hnRNP LL exhibit overlapping but distinct RNA binding constraints.

Smith SA, Ray D, Cook KB, Mallory MJ, Hughes TR, Lynch KW. Smith SA, et al. Among authors: ray d. PLoS One. 2013 Nov 11;8(11):e80701. doi: 10.1371/journal.pone.0080701. eCollection 2013. PLoS One. 2013. PMID: 24244709 Free PMC article.

9

Identifying mRNA sequence elements for target recognition by human Argonaute proteins.

Li J, Kim T, Nutiu R, Ray D, Hughes TR, Zhang Z. Li J, et al. Among authors: ray d. Genome Res. 2014 May;24(5):775-85. doi: 10.1101/gr.162230.113. Epub 2014 Mar 24. Genome Res. 2014. PMID: 24663241 Free PMC article.

10

A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types.

Norris AD, Gao S, Norris ML, Ray D, Ramani AK, Fraser AG, Morris Q, Hughes TR, Zhen M, Calarco JA. Norris AD, et al. Among authors: ray d. Mol Cell. 2014 Jun 19;54(6):946-959. doi: 10.1016/j.molcel.2014.05.004. Epub 2014 Jun 5. Mol Cell. 2014. PMID: 24910101 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

2,073 results

Search Page