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pcaMethods--a bioconductor package providing PCA methods for incomplete data.
Stacklies W, Redestig H, Scholz M, Walther D, Selbig J. Stacklies W, et al. Among authors: redestig h. Bioinformatics. 2007 May 1;23(9):1164-7. doi: 10.1093/bioinformatics/btm069. Epub 2007 Mar 7. Bioinformatics. 2007. PMID: 17344241
Detection and interpretation of metabolite-transcript coresponses using combined profiling data.
Redestig H, Costa IG. Redestig H, et al. Bioinformatics. 2011 Jul 1;27(13):i357-65. doi: 10.1093/bioinformatics/btr231. Bioinformatics. 2011. PMID: 21685093 Free PMC article.
Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis.
Redestig H, Kusano M, Fukushima A, Matsuda F, Saito K, Arita M. Redestig H, et al. BMC Bioinformatics. 2010 Apr 29;11:214. doi: 10.1186/1471-2105-11-214. BMC Bioinformatics. 2010. PMID: 20426876 Free PMC article.
PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments.
Usadel B, Nagel A, Steinhauser D, Gibon Y, Bläsing OE, Redestig H, Sreenivasulu N, Krall L, Hannah MA, Poree F, Fernie AR, Stitt M. Usadel B, et al. Among authors: redestig h. BMC Bioinformatics. 2006 Dec 18;7:535. doi: 10.1186/1471-2105-7-535. BMC Bioinformatics. 2006. PMID: 17176458 Free PMC article.
TargetSearch--a Bioconductor package for the efficient preprocessing of GC-MS metabolite profiling data.
Cuadros-Inostroza A, Caldana C, Redestig H, Kusano M, Lisec J, Peña-Cortés H, Willmitzer L, Hannah MA. Cuadros-Inostroza A, et al. Among authors: redestig h. BMC Bioinformatics. 2009 Dec 16;10:428. doi: 10.1186/1471-2105-10-428. BMC Bioinformatics. 2009. PMID: 20015393 Free PMC article.
Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana.
Redestig H, Weicht D, Selbig J, Hannah MA. Redestig H, et al. BMC Bioinformatics. 2007 Nov 18;8:454. doi: 10.1186/1471-2105-8-454. BMC Bioinformatics. 2007. PMID: 18021423 Free PMC article.
Integrating functional knowledge during sample clustering for microarray data using unsupervised decision trees.
Redestig H, Repsilber D, Sohler F, Selbig J. Redestig H, et al. Biom J. 2007 Apr;49(2):214-29. doi: 10.1002/bimj.200610278. Biom J. 2007. PMID: 17476945
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses.
Usadel B, Nagel A, Thimm O, Redestig H, Blaesing OE, Palacios-Rojas N, Selbig J, Hannemann J, Piques MC, Steinhauser D, Scheible WR, Gibon Y, Morcuende R, Weicht D, Meyer S, Stitt M. Usadel B, et al. Among authors: redestig h. Plant Physiol. 2005 Jul;138(3):1195-204. doi: 10.1104/pp.105.060459. Plant Physiol. 2005. PMID: 16009995 Free PMC article. Review.
Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes.
Diaz C, Kusano M, Sulpice R, Araki M, Redestig H, Saito K, Stitt M, Shin R. Diaz C, et al. Among authors: redestig h. BMC Syst Biol. 2011 Nov 21;5:192. doi: 10.1186/1752-0509-5-192. BMC Syst Biol. 2011. PMID: 22104211 Free PMC article.
Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics.
Redestig H, Kusano M, Ebana K, Kobayashi M, Oikawa A, Okazaki Y, Matsuda F, Arita M, Fujita N, Saito K. Redestig H, et al. BMC Syst Biol. 2011 Oct 28;5:176. doi: 10.1186/1752-0509-5-176. BMC Syst Biol. 2011. PMID: 22034874 Free PMC article.
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