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Genetic isolation of ADA2: a potential transcriptional adaptor required for function of certain acidic activation domains.
Cell. 1992 Jul 24;70(2):251-65. doi: 10.1016/0092-8674(92)90100-q.
Cell. 1992.
PMID: 1638630
Binding of basal transcription factor TFIIH to the acidic activation domains of VP16 and p53.
Xiao H, Pearson A, Coulombe B, Truant R, Zhang S, Regier JL, Triezenberg SJ, Reinberg D, Flores O, Ingles CJ, et al.
Xiao H, et al. Among authors: regier jl.
Mol Cell Biol. 1994 Oct;14(10):7013-24. doi: 10.1128/mcb.14.10.7013-7024.1994.
Mol Cell Biol. 1994.
PMID: 7935417
Free PMC article.
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Pattern of aromatic and hydrophobic amino acids critical for one of two subdomains of the VP16 transcriptional activator.
Regier JL, Shen F, Triezenberg SJ.
Regier JL, et al.
Proc Natl Acad Sci U S A. 1993 Feb 1;90(3):883-7. doi: 10.1073/pnas.90.3.883.
Proc Natl Acad Sci U S A. 1993.
PMID: 8381535
Free PMC article.
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The scverse project provides a computational ecosystem for single-cell omics data analysis.
Virshup I, Bredikhin D, Heumos L, Palla G, Sturm G, Gayoso A, Kats I, Koutrouli M; Scverse Community; Berger B, Pe'er D, Regev A, Teichmann SA, Finotello F, Wolf FA, Yosef N, Stegle O, Theis FJ.
Virshup I, et al.
Nat Biotechnol. 2023 May;41(5):604-606. doi: 10.1038/s41587-023-01733-8.
Nat Biotechnol. 2023.
PMID: 37037904
No abstract available.
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A Python library for probabilistic analysis of single-cell omics data.
Gayoso A, Lopez R, Xing G, Boyeau P, Valiollah Pour Amiri V, Hong J, Wu K, Jayasuriya M, Mehlman E, Langevin M, Liu Y, Samaran J, Misrachi G, Nazaret A, Clivio O, Xu C, Ashuach T, Gabitto M, Lotfollahi M, Svensson V, da Veiga Beltrame E, Kleshchevnikov V, Talavera-López C, Pachter L, Theis FJ, Streets A, Jordan MI, Regier J, Yosef N.
Gayoso A, et al.
Nat Biotechnol. 2022 Feb;40(2):163-166. doi: 10.1038/s41587-021-01206-w.
Nat Biotechnol. 2022.
PMID: 35132262
No abstract available.
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Deep generative modeling for single-cell transcriptomics.
Lopez R, Regier J, Cole MB, Jordan MI, Yosef N.
Lopez R, et al.
Nat Methods. 2018 Dec;15(12):1053-1058. doi: 10.1038/s41592-018-0229-2. Epub 2018 Nov 30.
Nat Methods. 2018.
PMID: 30504886
Free PMC article.
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Probabilistic harmonization and annotation of single-cell transcriptomics data with deep generative models.
Xu C, Lopez R, Mehlman E, Regier J, Jordan MI, Yosef N.
Xu C, et al.
Mol Syst Biol. 2021 Jan;17(1):e9620. doi: 10.15252/msb.20209620.
Mol Syst Biol. 2021.
PMID: 33491336
Free PMC article.
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Joint probabilistic modeling of single-cell multi-omic data with totalVI.
Gayoso A, Steier Z, Lopez R, Regier J, Nazor KL, Streets A, Yosef N.
Gayoso A, et al.
Nat Methods. 2021 Mar;18(3):272-282. doi: 10.1038/s41592-020-01050-x. Epub 2021 Feb 15.
Nat Methods. 2021.
PMID: 33589839
Free PMC article.
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