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124 results
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MatrixDB, a database focused on extracellular protein-protein and protein-carbohydrate interactions.
Chautard E, Ballut L, Thierry-Mieg N, Ricard-Blum S. Chautard E, et al. Bioinformatics. 2009 Mar 1;25(5):690-1. doi: 10.1093/bioinformatics/btp025. Epub 2009 Jan 15. Bioinformatics. 2009. PMID: 19147664 Free PMC article.
Proteases decode the extracellular matrix cryptome.
Ricard-Blum S, Vallet SD. Ricard-Blum S, et al. Biochimie. 2016 Mar;122:300-13. doi: 10.1016/j.biochi.2015.09.016. Epub 2015 Sep 14. Biochimie. 2016. PMID: 26382969 Review.
Large-scale investigation of Leishmania interaction networks with host extracellular matrix by surface plasmon resonance imaging.
Fatoux-Ardore M, Peysselon F, Weiss A, Bastien P, Pratlong F, Ricard-Blum S. Fatoux-Ardore M, et al. Infect Immun. 2014 Feb;82(2):594-606. doi: 10.1128/IAI.01146-13. Epub 2013 Nov 25. Infect Immun. 2014. PMID: 24478075 Free PMC article.
Mapping of heparin/heparan sulfate binding sites on αvβ3 integrin by molecular docking.
Ballut L, Sapay N, Chautard E, Imberty A, Ricard-Blum S. Ballut L, et al. J Mol Recognit. 2013 Feb;26(2):76-85. doi: 10.1002/jmr.2250. J Mol Recognit. 2013. PMID: 23334915
Matricryptins derived from collagens and proteoglycans.
Ricard-Blum S, Ballut L. Ricard-Blum S, et al. Front Biosci (Landmark Ed). 2011 Jan 1;16:674-97. doi: 10.2741/3712. Front Biosci (Landmark Ed). 2011. PMID: 21196195 Review.
The first draft of the endostatin interaction network.
Faye C, Chautard E, Olsen BR, Ricard-Blum S. Faye C, et al. J Biol Chem. 2009 Aug 14;284(33):22041-7. doi: 10.1074/jbc.M109.002964. Epub 2009 Jun 19. J Biol Chem. 2009. PMID: 19542224 Free PMC article.
MatrixDB: integration of new data with a focus on glycosaminoglycan interactions.
Clerc O, Deniaud M, Vallet SD, Naba A, Rivet A, Perez S, Thierry-Mieg N, Ricard-Blum S. Clerc O, et al. Nucleic Acids Res. 2019 Jan 8;47(D1):D376-D381. doi: 10.1093/nar/gky1035. Nucleic Acids Res. 2019. PMID: 30371822 Free PMC article.
Glycosaminoglycanomics: where we are.
Ricard-Blum S, Lisacek F. Ricard-Blum S, et al. Glycoconj J. 2017 Jun;34(3):339-349. doi: 10.1007/s10719-016-9747-2. Epub 2016 Nov 30. Glycoconj J. 2017. PMID: 27900575 Review.
Fragments generated upon extracellular matrix remodeling: Biological regulators and potential drugs.
Ricard-Blum S, Vallet SD. Ricard-Blum S, et al. Matrix Biol. 2019 Jan;75-76:170-189. doi: 10.1016/j.matbio.2017.11.005. Epub 2017 Nov 11. Matrix Biol. 2019. PMID: 29133183 Review.
A pipeline to translate glycosaminoglycan sequences into 3D models. Application to the exploration of glycosaminoglycan conformational space.
Clerc O, Mariethoz J, Rivet A, Lisacek F, Pérez S, Ricard-Blum S. Clerc O, et al. Glycobiology. 2019 Jan 1;29(1):36-44. doi: 10.1093/glycob/cwy084. Glycobiology. 2019. PMID: 30239692
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