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Page 1
Reordering contigs of draft genomes using the Mauve aligner.
Rissman AI, Mau B, Biehl BS, Darling AE, Glasner JD, Perna NT. Rissman AI, et al. Bioinformatics. 2009 Aug 15;25(16):2071-3. doi: 10.1093/bioinformatics/btp356. Epub 2009 Jun 10. Bioinformatics. 2009. PMID: 19515959 Free PMC article.
Enteropathogen Resource Integration Center (ERIC): bioinformatics support for research on biodefense-relevant enterobacteria.
Glasner JD, Plunkett G 3rd, Anderson BD, Baumler DJ, Biehl BS, Burland V, Cabot EL, Darling AE, Mau B, Neeno-Eckwall EC, Pot D, Qiu Y, Rissman AI, Worzella S, Zaremba S, Fedorko J, Hampton T, Liss P, Rusch M, Shaker M, Shaull L, Shetty P, Thotakura S, Whitmore J, Blattner FR, Greene JM, Perna NT. Glasner JD, et al. Among authors: rissman ai. Nucleic Acids Res. 2008 Jan;36(Database issue):D519-23. doi: 10.1093/nar/gkm973. Epub 2007 Nov 13. Nucleic Acids Res. 2008. PMID: 17999997 Free PMC article.
Niche-specificity and the variable fraction of the Pectobacterium pan-genome.
Glasner JD, Marquez-Villavicencio M, Kim HS, Jahn CE, Ma B, Biehl BS, Rissman AI, Mole B, Yi X, Yang CH, Dangl JL, Grant SR, Perna NT, Charkowski AO. Glasner JD, et al. Among authors: rissman ai. Mol Plant Microbe Interact. 2008 Dec;21(12):1549-60. doi: 10.1094/MPMI-21-12-1549. Mol Plant Microbe Interact. 2008. PMID: 18986251 Free article.
EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments.
Leng N, Dawson JA, Thomson JA, Ruotti V, Rissman AI, Smits BM, Haag JD, Gould MN, Stewart RM, Kendziorski C. Leng N, et al. Among authors: rissman ai. Bioinformatics. 2013 Apr 15;29(8):1035-43. doi: 10.1093/bioinformatics/btt087. Epub 2013 Feb 21. Bioinformatics. 2013. PMID: 23428641 Free PMC article.
The gene desert mammary carcinoma susceptibility locus Mcs1a regulates Nr2f1 modifying mammary epithelial cell differentiation and proliferation.
Smits BM, Haag JD, Rissman AI, Sharma D, Tran A, Schoenborn AA, Baird RC, Peiffer DS, Leinweber DQ, Muelbl MJ, Meilahn AL, Eichelberg MR, Leng N, Kendziorski C, John MC, Powers PA, Alexander CM, Gould MN. Smits BM, et al. Among authors: rissman ai. PLoS Genet. 2013 Jun;9(6):e1003549. doi: 10.1371/journal.pgen.1003549. Epub 2013 Jun 13. PLoS Genet. 2013. PMID: 23785296 Free PMC article.