Ritz A - Search Results

1

Detection of recurrent rearrangement breakpoints from copy number data.

Ritz A, Paris PL, Ittmann MM, Collins C, Raphael BJ. Ritz A, et al. BMC Bioinformatics. 2011 Apr 21;12:114. doi: 10.1186/1471-2105-12-114. BMC Bioinformatics. 2011. PMID: 21510904 Free PMC article.

2

Structural variation analysis with strobe reads.

Ritz A, Bashir A, Raphael BJ. Ritz A, et al. Bioinformatics. 2010 May 15;26(10):1291-8. doi: 10.1093/bioinformatics/btq153. Epub 2010 Apr 8. Bioinformatics. 2010. PMID: 20378554

3

Reconstructing cancer genomes from paired-end sequencing data.

Oesper L, Ritz A, Aerni SJ, Drebin R, Raphael BJ. Oesper L, et al. Among authors: ritz a. BMC Bioinformatics. 2012 Apr 19;13 Suppl 6(Suppl 6):S10. doi: 10.1186/1471-2105-13-S6-S10. BMC Bioinformatics. 2012. PMID: 22537039 Free PMC article.

4

Gremlin: an interactive visualization model for analyzing genomic rearrangements.

O'Brien TM, Ritz AM, Raphael BJ, Laidlaw DH. O'Brien TM, et al. IEEE Trans Vis Comput Graph. 2010 Nov-Dec;16(6):918-26. doi: 10.1109/TVCG.2010.163. IEEE Trans Vis Comput Graph. 2010. PMID: 20975128

5

Discovery of phosphorylation motif mixtures in phosphoproteomics data.

Ritz A, Shakhnarovich G, Salomon AR, Raphael BJ. Ritz A, et al. Bioinformatics. 2009 Jan 1;25(1):14-21. doi: 10.1093/bioinformatics/btn569. Epub 2008 Nov 7. Bioinformatics. 2009. PMID: 18996944 Free PMC article.

6

Integrated genomics of ovarian xenograft tumor progression and chemotherapy response.

Stuckey A, Fischer A, Miller DH, Hillenmeyer S, Kim KK, Ritz A, Singh RK, Raphael BJ, Brard L, Brodsky AS. Stuckey A, et al. Among authors: ritz a. BMC Cancer. 2011 Jul 22;11:308. doi: 10.1186/1471-2407-11-308. BMC Cancer. 2011. PMID: 21781307 Free PMC article.

7

Characterization of structural variants with single molecule and hybrid sequencing approaches.

Ritz A, Bashir A, Sindi S, Hsu D, Hajirasouliha I, Raphael BJ. Ritz A, et al. Bioinformatics. 2014 Dec 15;30(24):3458-66. doi: 10.1093/bioinformatics/btu714. Epub 2014 Oct 28. Bioinformatics. 2014. PMID: 25355789 Free PMC article.

8

Quantitative time-resolved phosphoproteomic analysis of mast cell signaling.

Cao L, Yu K, Banh C, Nguyen V, Ritz A, Raphael BJ, Kawakami Y, Kawakami T, Salomon AR. Cao L, et al. Among authors: ritz a. J Immunol. 2007 Nov 1;179(9):5864-76. doi: 10.4049/jimmunol.179.9.5864. J Immunol. 2007. PMID: 17947660 Free PMC article.

9

A new approach for quantitative phosphoproteomic dissection of signaling pathways applied to T cell receptor activation.

Nguyen V, Cao L, Lin JT, Hung N, Ritz A, Yu K, Jianu R, Ulin SP, Raphael BJ, Laidlaw DH, Brossay L, Salomon AR. Nguyen V, et al. Among authors: ritz a. Mol Cell Proteomics. 2009 Nov;8(11):2418-31. doi: 10.1074/mcp.M800307-MCP200. Epub 2009 Jul 14. Mol Cell Proteomics. 2009. PMID: 19605366 Free PMC article.

10

Quantitative phosphoproteomics reveals SLP-76 dependent regulation of PAG and Src family kinases in T cells.

Cao L, Ding Y, Hung N, Yu K, Ritz A, Raphael BJ, Salomon AR. Cao L, et al. Among authors: ritz a. PLoS One. 2012;7(10):e46725. doi: 10.1371/journal.pone.0046725. Epub 2012 Oct 11. PLoS One. 2012. PMID: 23071622 Free PMC article.

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