Roberts BS - Search Results

1

Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding patterns.

Kirby MK, Ramaker RC, Roberts BS, Lasseigne BN, Gunther DS, Burwell TC, Davis NS, Gulzar ZG, Absher DM, Cooper SJ, Brooks JD, Myers RM. Kirby MK, et al. Among authors: roberts bs. BMC Cancer. 2017 Apr 17;17(1):273. doi: 10.1186/s12885-017-3252-2. BMC Cancer. 2017. PMID: 28412973 Free PMC article.

2

Recurrent read-through fusion transcripts in breast cancer.

Varley KE, Gertz J, Roberts BS, Davis NS, Bowling KM, Kirby MK, Nesmith AS, Oliver PG, Grizzle WE, Forero A, Buchsbaum DJ, LoBuglio AF, Myers RM. Varley KE, et al. Among authors: roberts bs. Breast Cancer Res Treat. 2014 Jul;146(2):287-97. doi: 10.1007/s10549-014-3019-2. Epub 2014 Jun 15. Breast Cancer Res Treat. 2014. PMID: 24929677 Free PMC article.

3

Blocking of targeted microRNAs from next-generation sequencing libraries.

Roberts BS, Hardigan AA, Kirby MK, Fitz-Gerald MB, Wilcox CM, Kimberly RP, Myers RM. Roberts BS, et al. Nucleic Acids Res. 2015 Dec 2;43(21):e145. doi: 10.1093/nar/gkv724. Epub 2015 Jul 23. Nucleic Acids Res. 2015. PMID: 26209131 Free PMC article.

4

CETCh-seq: CRISPR epitope tagging ChIP-seq of DNA-binding proteins.

Savic D, Partridge EC, Newberry KM, Smith SB, Meadows SK, Roberts BS, Mackiewicz M, Mendenhall EM, Myers RM. Savic D, et al. Among authors: roberts bs. Genome Res. 2015 Oct;25(10):1581-9. doi: 10.1101/gr.193540.115. Epub 2015 Sep 9. Genome Res. 2015. PMID: 26355004 Free PMC article.

5

Promoter-distal RNA polymerase II binding discriminates active from inactive CCAAT/ enhancer-binding protein beta binding sites.

Savic D, Roberts BS, Carleton JB, Partridge EC, White MA, Cohen BA, Cooper GM, Gertz J, Myers RM. Savic D, et al. Among authors: roberts bs. Genome Res. 2015 Dec;25(12):1791-800. doi: 10.1101/gr.191593.115. Epub 2015 Oct 20. Genome Res. 2015. PMID: 26486725 Free PMC article.

6

Distinct gene regulatory programs define the inhibitory effects of liver X receptors and PPARG on cancer cell proliferation.

Savic D, Ramaker RC, Roberts BS, Dean EC, Burwell TC, Meadows SK, Cooper SJ, Garabedian MJ, Gertz J, Myers RM. Savic D, et al. Among authors: roberts bs. Genome Med. 2016 Jul 11;8(1):74. doi: 10.1186/s13073-016-0328-6. Genome Med. 2016. PMID: 27401066 Free PMC article.

7

Genomic regulation of invasion by STAT3 in triple negative breast cancer.

McDaniel JM, Varley KE, Gertz J, Savic DS, Roberts BS, Bailey SK, Shevde LA, Ramaker RC, Lasseigne BN, Kirby MK, Newberry KM, Partridge EC, Jones AL, Boone B, Levy SE, Oliver PG, Sexton KC, Grizzle WE, Forero A, Buchsbaum DJ, Cooper SJ, Myers RM. McDaniel JM, et al. Among authors: roberts bs. Oncotarget. 2017 Jan 31;8(5):8226-8238. doi: 10.18632/oncotarget.14153. Oncotarget. 2017. PMID: 28030809 Free PMC article.

8

aRNApipe: a balanced, efficient and distributed pipeline for processing RNA-seq data in high-performance computing environments.

Alonso A, Lasseigne BN, Williams K, Nielsen J, Ramaker RC, Hardigan AA, Johnston B, Roberts BS, Cooper SJ, Marsal S, Myers RM. Alonso A, et al. Among authors: roberts bs. Bioinformatics. 2017 Jun 1;33(11):1727-1729. doi: 10.1093/bioinformatics/btx023. Bioinformatics. 2017. PMID: 28108448 Free PMC article.

9

Discovery and Validation of Circulating Biomarkers of Colorectal Adenoma by High-Depth Small RNA Sequencing.

Roberts BS, Hardigan AA, Moore DE, Ramaker RC, Jones AL, Fitz-Gerald MB, Cooper GM, Wilcox CM, Kimberly RP, Myers RM. Roberts BS, et al. Clin Cancer Res. 2018 May 1;24(9):2092-2099. doi: 10.1158/1078-0432.CCR-17-1960. Epub 2018 Feb 28. Clin Cancer Res. 2018. PMID: 29490987 Free PMC article.

10

CRISPR/Cas9-targeted removal of unwanted sequences from small-RNA sequencing libraries.

Hardigan AA, Roberts BS, Moore DE, Ramaker RC, Jones AL, Myers RM. Hardigan AA, et al. Among authors: roberts bs. Nucleic Acids Res. 2019 Aug 22;47(14):e84. doi: 10.1093/nar/gkz425. Nucleic Acids Res. 2019. PMID: 31165880 Free PMC article.

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