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InnateDB: facilitating systems-level analyses of the mammalian innate immune response.
Lynn DJ, Winsor GL, Chan C, Richard N, Laird MR, Barsky A, Gardy JL, Roche FM, Chan TH, Shah N, Lo R, Naseer M, Que J, Yau M, Acab M, Tulpan D, Whiteside MD, Chikatamarla A, Mah B, Munzner T, Hokamp K, Hancock RE, Brinkman FS. Lynn DJ, et al. Among authors: roche fm. Mol Syst Biol. 2008;4:218. doi: 10.1038/msb.2008.55. Epub 2008 Sep 2. Mol Syst Biol. 2008. PMID: 18766178 Free PMC article.
ArrayPipe: a flexible processing pipeline for microarray data.
Hokamp K, Roche FM, Acab M, Rousseau ME, Kuo B, Goode D, Aeschliman D, Bryan J, Babiuk LA, Hancock RE, Brinkman FS. Hokamp K, et al. Among authors: roche fm. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W457-9. doi: 10.1093/nar/gkh446. Nucleic Acids Res. 2004. PMID: 15215429 Free PMC article.
Molecular analyses of disease pathogenesis: application of bovine microarrays.
Wilson HL, Aich P, Roche FM, Jalal S, Hodgson PD, Brinkman FS, Potter A, Babiuk LA, Griebel PJ. Wilson HL, et al. Among authors: roche fm. Vet Immunol Immunopathol. 2005 May 15;105(3-4):277-87. doi: 10.1016/j.vetimm.2005.02.015. Vet Immunol Immunopathol. 2005. PMID: 15808306 Free PMC article. Review.
Improving the specificity of high-throughput ortholog prediction.
Fulton DL, Li YY, Laird MR, Horsman BG, Roche FM, Brinkman FS. Fulton DL, et al. Among authors: roche fm. BMC Bioinformatics. 2006 May 28;7:270. doi: 10.1186/1471-2105-7-270. BMC Bioinformatics. 2006. PMID: 16729895 Free PMC article.
Bovine and human cathelicidin cationic host defense peptides similarly suppress transcriptional responses to bacterial lipopolysaccharide.
Mookherjee N, Wilson HL, Doria S, Popowych Y, Falsafi R, Yu JJ, Li Y, Veatch S, Roche FM, Brown KL, Brinkman FS, Hokamp K, Potter A, Babiuk LA, Griebel PJ, Hancock RE. Mookherjee N, et al. Among authors: roche fm. J Leukoc Biol. 2006 Dec;80(6):1563-74. doi: 10.1189/jlb.0106048. Epub 2006 Aug 30. J Leukoc Biol. 2006. PMID: 16943385
32 results