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casanova plays an early and essential role in endoderm formation in zebrafish.
Alexander J, Rothenberg M, Henry GL, Stainier DY. Alexander J, et al. Dev Biol. 1999 Nov 15;215(2):343-57. doi: 10.1006/dbio.1999.9441. Dev Biol. 1999. PMID: 10545242
salvador--The persistence of proliferation.
Rothenberg ME, Jan YN. Rothenberg ME, et al. Cancer Cell. 2002 Sep;2(3):171-3. doi: 10.1016/s1535-6108(02)00131-9. Cancer Cell. 2002. PMID: 12242148 Review.
The Myc connection: ES cells and cancer.
Rothenberg ME, Clarke MF, Diehn M. Rothenberg ME, et al. Cell. 2010 Oct 15;143(2):184-6. doi: 10.1016/j.cell.2010.09.046. Cell. 2010. PMID: 20946977
Quantitative assessment of single-cell RNA-sequencing methods.
Wu AR, Neff NF, Kalisky T, Dalerba P, Treutlein B, Rothenberg ME, Mburu FM, Mantalas GL, Sim S, Clarke MF, Quake SR. Wu AR, et al. Nat Methods. 2014 Jan;11(1):41-6. doi: 10.1038/nmeth.2694. Epub 2013 Oct 20. Nat Methods. 2014. PMID: 24141493 Free PMC article.
Control of inflammation by stromal Hedgehog pathway activation restrains colitis.
Lee JJ, Rothenberg ME, Seeley ES, Zimdahl B, Kawano S, Lu WJ, Shin K, Sakata-Kato T, Chen JK, Diehn M, Clarke MF, Beachy PA. Lee JJ, et al. Proc Natl Acad Sci U S A. 2016 Nov 22;113(47):E7545-E7553. doi: 10.1073/pnas.1616447113. Epub 2016 Nov 4. Proc Natl Acad Sci U S A. 2016. PMID: 27815529 Free PMC article.
Geometry of the Gene Expression Space of Individual Cells.
Korem Y, Szekely P, Hart Y, Sheftel H, Hausser J, Mayo A, Rothenberg ME, Kalisky T, Alon U. Korem Y, et al. PLoS Comput Biol. 2015 Jul 10;11(7):e1004224. doi: 10.1371/journal.pcbi.1004224. eCollection 2015 Jul. PLoS Comput Biol. 2015. PMID: 26161936 Free PMC article.
Helicobacter pylori Activates and Expands Lgr5(+) Stem Cells Through Direct Colonization of the Gastric Glands.
Sigal M, Rothenberg ME, Logan CY, Lee JY, Honaker RW, Cooper RL, Passarelli B, Camorlinga M, Bouley DM, Alvarez G, Nusse R, Torres J, Amieva MR. Sigal M, et al. Gastroenterology. 2015 Jun;148(7):1392-404.e21. doi: 10.1053/j.gastro.2015.02.049. Epub 2015 Feb 26. Gastroenterology. 2015. PMID: 25725293
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