Rychlewski L - Search Results

1

Comprehensive structural and substrate specificity classification of the Saccharomyces cerevisiae methyltransferome.

Wlodarski T, Kutner J, Towpik J, Knizewski L, Rychlewski L, Kudlicki A, Rowicka M, Dziembowski A, Ginalski K. Wlodarski T, et al. Among authors: rychlewski l. PLoS One. 2011;6(8):e23168. doi: 10.1371/journal.pone.0023168. Epub 2011 Aug 9. PLoS One. 2011. PMID: 21858014 Free PMC article.

2

Protein structure prediction of CASP5 comparative modeling and fold recognition targets using consensus alignment approach and 3D assessment.

Ginalski K, Rychlewski L. Ginalski K, et al. Among authors: rychlewski l. Proteins. 2003;53 Suppl 6:410-7. doi: 10.1002/prot.10548. Proteins. 2003. PMID: 14579329

3

Human herpesvirus 1 UL24 gene encodes a potential PD-(D/E)XK endonuclease.

Knizewski L, Kinch L, Grishin NV, Rychlewski L, Ginalski K. Knizewski L, et al. Among authors: rychlewski l. J Virol. 2006 Mar;80(5):2575-7. doi: 10.1128/JVI.80.5.2575-2577.2006. J Virol. 2006. PMID: 16474163 Free PMC article.

4

Realm of PD-(D/E)XK nuclease superfamily revisited: detection of novel families with modified transitive meta profile searches.

Knizewski L, Kinch LN, Grishin NV, Rychlewski L, Ginalski K. Knizewski L, et al. Among authors: rychlewski l. BMC Struct Biol. 2007 Jun 20;7:40. doi: 10.1186/1472-6807-7-40. BMC Struct Biol. 2007. PMID: 17584917 Free PMC article.

5

Comprehensive classification of nucleotidyltransferase fold proteins: identification of novel families and their representatives in human.

Kuchta K, Knizewski L, Wyrwicz LS, Rychlewski L, Ginalski K. Kuchta K, et al. Among authors: rychlewski l. Nucleic Acids Res. 2009 Dec;37(22):7701-14. doi: 10.1093/nar/gkp854. Nucleic Acids Res. 2009. PMID: 19833706 Free PMC article.

6

Sequence, structure and functional diversity of PD-(D/E)XK phosphodiesterase superfamily.

Steczkiewicz K, Muszewska A, Knizewski L, Rychlewski L, Ginalski K. Steczkiewicz K, et al. Among authors: rychlewski l. Nucleic Acids Res. 2012 Aug;40(15):7016-45. doi: 10.1093/nar/gks382. Epub 2012 May 25. Nucleic Acids Res. 2012. PMID: 22638584 Free PMC article.

7

FAM46 proteins are novel eukaryotic non-canonical poly(A) polymerases.

Kuchta K, Muszewska A, Knizewski L, Steczkiewicz K, Wyrwicz LS, Pawlowski K, Rychlewski L, Ginalski K. Kuchta K, et al. Among authors: rychlewski l. Nucleic Acids Res. 2016 May 5;44(8):3534-48. doi: 10.1093/nar/gkw222. Epub 2016 Apr 7. Nucleic Acids Res. 2016. PMID: 27060136 Free PMC article.

8

Virtual high throughput screening using combined random forest and flexible docking.

Plewczynski D, von Grotthuss M, Rychlewski L, Ginalski K. Plewczynski D, et al. Among authors: rychlewski l. Comb Chem High Throughput Screen. 2009 Jun;12(5):484-9. doi: 10.2174/138620709788489000. Comb Chem High Throughput Screen. 2009. PMID: 19519327

9

HarmonyDOCK: the structural analysis of poses in protein-ligand docking.

Plewczynski D, Philips A, Von Grotthuss M, Rychlewski L, Ginalski K. Plewczynski D, et al. Among authors: rychlewski l. J Comput Biol. 2014 Mar;21(3):247-56. doi: 10.1089/cmb.2009.0111. Epub 2010 Nov 20. J Comput Biol. 2014. PMID: 21091053

10

Detection of reliable and unexpected protein fold predictions using 3D-Jury.

Ginalski K, Rychlewski L. Ginalski K, et al. Among authors: rychlewski l. Nucleic Acids Res. 2003 Jul 1;31(13):3291-2. doi: 10.1093/nar/gkg503. Nucleic Acids Res. 2003. PMID: 12824309 Free PMC article.

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