Ryu DE - Search Results

1

Linking transcriptional and genetic tumor heterogeneity through allele analysis of single-cell RNA-seq data.

Fan J, Lee HO, Lee S, Ryu DE, Lee S, Xue C, Kim SJ, Kim K, Barkas N, Park PJ, Park WY, Kharchenko PV. Fan J, et al. Among authors: ryu de. Genome Res. 2018 Aug;28(8):1217-1227. doi: 10.1101/gr.228080.117. Epub 2018 Jun 13. Genome Res. 2018. PMID: 29898899 Free PMC article.

2

Deciphering intratumor heterogeneity using cancer genome analysis.

Ryu D, Joung JG, Kim NK, Kim KT, Park WY. Ryu D, et al. Hum Genet. 2016 Jun;135(6):635-42. doi: 10.1007/s00439-016-1670-x. Epub 2016 Apr 28. Hum Genet. 2016. PMID: 27126234 Review.

3

Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker.

Ryu D, Kim HJ, Joung JG, Lee HO, Bae JS, Kim SJ, Kim H, Park WY, Kim K. Ryu D, et al. Oncotarget. 2016 Jul 26;7(30):47127-47133. doi: 10.18632/oncotarget.9478. Oncotarget. 2016. PMID: 27223072 Free PMC article.

4

The mutational landscape of ocular marginal zone lymphoma identifies frequent alterations in TNFAIP3 followed by mutations in TBL1XR1 and CREBBP.

Jung H, Yoo HY, Lee SH, Shin S, Kim SC, Lee S, Joung JG, Nam JY, Ryu D, Yun JW, Choi JK, Ghosh A, Kim KK, Kim SJ, Kim WS, Park WY, Ko YH. Jung H, et al. Oncotarget. 2017 Mar 7;8(10):17038-17049. doi: 10.18632/oncotarget.14928. Oncotarget. 2017. PMID: 28152507 Free PMC article.

5

Prevalence and detection of low-allele-fraction variants in clinical cancer samples.

Shin HT, Choi YL, Yun JW, Kim NKD, Kim SY, Jeon HJ, Nam JY, Lee C, Ryu D, Kim SC, Park K, Lee E, Bae JS, Son DS, Joung JG, Lee J, Kim ST, Ahn MJ, Lee SH, Ahn JS, Lee WY, Oh BY, Park YH, Lee JE, Lee KH, Kim HC, Kim KM, Im YH, Park K, Park PJ, Park WY. Shin HT, et al. Nat Commun. 2017 Nov 9;8(1):1377. doi: 10.1038/s41467-017-01470-y. Nat Commun. 2017. PMID: 29123093 Free PMC article.

6

Correction: The mutational landscape of ocular marginal zone lymphoma identifies frequent alterations in TNFAIP3 followed by mutations in TBL1XR1 and CREBBP.

Jung H, Yoo HY, Lee SH, Shin S, Kim SC, Lee S, Joung JG, Nam JY, Ryu D, Yun JW, Choi JK, Ghosh A, Kim KK, Kim SJ, Kim WS, Park WY, Ko YH. Jung H, et al. Oncotarget. 2018 Aug 28;9(67):32882. doi: 10.18632/oncotarget.26080. eCollection 2018 Aug 28. Oncotarget. 2018. PMID: 30214692 Free PMC article.

7

Biomarkers Associated with Tumor Heterogeneity in Prostate Cancer.

Yun JW, Lee S, Ryu D, Park S, Park WY, Joung JG, Jeong J. Yun JW, et al. Transl Oncol. 2019 Jan;12(1):43-48. doi: 10.1016/j.tranon.2018.09.003. Epub 2018 Sep 25. Transl Oncol. 2019. PMID: 30265975 Free PMC article.

8

Paired whole exome and transcriptome analyses for the Immunogenomic changes during concurrent chemoradiotherapy in esophageal squamous cell carcinoma.

Park S, Joung JG, Min YW, Nam JY, Ryu D, Oh D, Park WY, Lee SH, Choi Y, Ahn JS, Ahn MJ, Park K, Sun JM. Park S, et al. J Immunother Cancer. 2019 May 16;7(1):128. doi: 10.1186/s40425-019-0609-x. J Immunother Cancer. 2019. PMID: 31097034 Free PMC article.

9

Alterations in the Transcriptional Programs of Myeloma Cells and the Microenvironment during Extramedullary Progression Affect Proliferation and Immune Evasion.

Ryu D, Kim SJ, Hong Y, Jo A, Kim N, Kim HJ, Lee HO, Kim K, Park WY. Ryu D, et al. Clin Cancer Res. 2020 Feb 15;26(4):935-944. doi: 10.1158/1078-0432.CCR-19-0694. Epub 2019 Sep 26. Clin Cancer Res. 2020. PMID: 31558476

10

Junction Location Identifier (JuLI): Accurate Detection of DNA Fusions in Clinical Sequencing for Precision Oncology.

Shin HT, Kim NKD, Yun JW, Lee B, Kyung S, Lee KW, Ryu D, Kim J, Bae JS, Park D, Choi YL, Lee SH, Ahn MJ, Park K, Park WY. Shin HT, et al. J Mol Diagn. 2020 Mar;22(3):304-318. doi: 10.1016/j.jmoldx.2019.10.015. Epub 2019 Dec 25. J Mol Diagn. 2020. PMID: 31881333 Free article.

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