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NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment.
Afantitis A, Melagraki G, Isigonis P, Tsoumanis A, Varsou DD, Valsami-Jones E, Papadiamantis A, Ellis LA, Sarimveis H, Doganis P, Karatzas P, Tsiros P, Liampa I, Lobaskin V, Greco D, Serra A, Kinaret PAS, Saarimäki LA, Grafström R, Kohonen P, Nymark P, Willighagen E, Puzyn T, Rybinska-Fryca A, Lyubartsev A, Alstrup Jensen K, Brandenburg JG, Lofts S, Svendsen C, Harrison S, Maier D, Tamm K, Jänes J, Sikk L, Dusinska M, Longhin E, Rundén-Pran E, Mariussen E, El Yamani N, Unger W, Radnik J, Tropsha A, Cohen Y, Leszczynski J, Ogilvie Hendren C, Wiesner M, Winkler D, Suzuki N, Yoon TH, Choi JS, Sanabria N, Gulumian M, Lynch I. Afantitis A, et al. Among authors: saarimaki la. Comput Struct Biotechnol J. 2020 Mar 7;18:583-602. doi: 10.1016/j.csbj.2020.02.023. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32226594 Free PMC article. Review.
TinderMIX: Time-dose integrated modelling of toxicogenomics data.
Serra A, Fratello M, Del Giudice G, Saarimäki LA, Paci M, Federico A, Greco D. Serra A, et al. Among authors: saarimaki la. Gigascience. 2020 May 1;9(5):giaa055. doi: 10.1093/gigascience/giaa055. Gigascience. 2020. PMID: 32449777 Free PMC article.
Prospects and challenges for FAIR toxicogenomics data.
Saarimäki LA, Melagraki G, Afantitis A, Lynch I, Greco D. Saarimäki LA, et al. Nat Nanotechnol. 2022 Jan;17(1):17-18. doi: 10.1038/s41565-021-01049-1. Epub 2021 Dec 23. Nat Nanotechnol. 2022. PMID: 34949777 No abstract available.
Computationally prioritized drugs inhibit SARS-CoV-2 infection and syncytia formation.
Serra A, Fratello M, Federico A, Ojha R, Provenzani R, Tasnadi E, Cattelani L, Del Giudice G, Kinaret PAS, Saarimäki LA, Pavel A, Kuivanen S, Cerullo V, Vapalahti O, Horvath P, Lieto AD, Yli-Kauhaluoma J, Balistreri G, Greco D. Serra A, et al. Among authors: saarimaki la. Brief Bioinform. 2022 Jan 17;23(1):bbab507. doi: 10.1093/bib/bbab507. Brief Bioinform. 2022. PMID: 34962256 Free PMC article.
Nextcast: A software suite to analyse and model toxicogenomics data.
Serra A, Saarimäki LA, Pavel A, Del Giudice G, Fratello M, Cattelani L, Federico A, Laurino O, Marwah VS, Fortino V, Scala G, Sofia Kinaret PA, Greco D. Serra A, et al. Among authors: saarimaki la. Comput Struct Biotechnol J. 2022 Mar 18;20:1413-1426. doi: 10.1016/j.csbj.2022.03.014. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35386103 Free PMC article.
23 results