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Analysis of large-scale sequencing of small RNAs.
Olson AJ, Brennecke J, Aravin AA, Hannon GJ, Sachidanandam R. Olson AJ, et al. Pac Symp Biocomput. 2008:126-36. doi: 10.1142/9789812776136_0014. Pac Symp Biocomput. 2008. PMID: 18229681
Influenza A virus-generated small RNAs regulate the switch from transcription to replication.
Perez JT, Varble A, Sachidanandam R, Zlatev I, Manoharan M, GarcĂ­a-Sastre A, tenOever BR. Perez JT, et al. Proc Natl Acad Sci U S A. 2010 Jun 22;107(25):11525-30. doi: 10.1073/pnas.1001984107. Epub 2010 Jun 1. Proc Natl Acad Sci U S A. 2010. PMID: 20534471 Free PMC article.
PIWI Slicing and EXD1 Drive Biogenesis of Nuclear piRNAs from Cytosolic Targets of the Mouse piRNA Pathway.
Yang Z, Chen KM, Pandey RR, Homolka D, Reuter M, Janeiro BK, Sachidanandam R, Fauvarque MO, McCarthy AA, Pillai RS. Yang Z, et al. Mol Cell. 2016 Jan 7;61(1):138-52. doi: 10.1016/j.molcel.2015.11.009. Epub 2015 Dec 6. Mol Cell. 2016. PMID: 26669262 Free PMC article.
PIWI Slicing and RNA Elements in Precursors Instruct Directional Primary piRNA Biogenesis.
Homolka D, Pandey RR, Goriaux C, Brasset E, Vaury C, Sachidanandam R, Fauvarque MO, Pillai RS. Homolka D, et al. Cell Rep. 2015 Jul 21;12(3):418-28. doi: 10.1016/j.celrep.2015.06.030. Epub 2015 Jul 9. Cell Rep. 2015. PMID: 26166577
Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing.
Le Thomas A, Stuwe E, Li S, Du J, Marinov G, Rozhkov N, Chen YC, Luo Y, Sachidanandam R, Toth KF, Patel D, Aravin AA. Le Thomas A, et al. Genes Dev. 2014 Aug 1;28(15):1667-80. doi: 10.1101/gad.245514.114. Genes Dev. 2014. PMID: 25085419 Free PMC article.
Vreteno, a gonad-specific protein, is essential for germline development and primary piRNA biogenesis in Drosophila.
Zamparini AL, Davis MY, Malone CD, Vieira E, Zavadil J, Sachidanandam R, Hannon GJ, Lehmann R. Zamparini AL, et al. Development. 2011 Sep;138(18):4039-50. doi: 10.1242/dev.069187. Epub 2011 Aug 10. Development. 2011. PMID: 21831924 Free PMC article.
piRNA production requires heterochromatin formation in Drosophila.
Rangan P, Malone CD, Navarro C, Newbold SP, Hayes PS, Sachidanandam R, Hannon GJ, Lehmann R. Rangan P, et al. Curr Biol. 2011 Aug 23;21(16):1373-9. doi: 10.1016/j.cub.2011.06.057. Epub 2011 Aug 4. Curr Biol. 2011. PMID: 21820311 Free PMC article.
Small RNA-based silencing strategies for transposons in the process of invading Drosophila species.
Rozhkov NV, Aravin AA, Zelentsova ES, Schostak NG, Sachidanandam R, McCombie WR, Hannon GJ, Evgen'ev MB. Rozhkov NV, et al. RNA. 2010 Aug;16(8):1634-45. doi: 10.1261/rna.2217810. Epub 2010 Jun 25. RNA. 2010. PMID: 20581131 Free PMC article.
Cloning of short hairpin RNAs for gene knockdown in mammalian cells.
Paddison PJ, Cleary M, Silva JM, Chang K, Sheth N, Sachidanandam R, Hannon GJ. Paddison PJ, et al. Nat Methods. 2004 Nov;1(2):163-7. doi: 10.1038/nmeth1104-163. Nat Methods. 2004. PMID: 16144086 No abstract available.
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