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UTGB toolkit for personalized genome browsers.
Saito TL, Yoshimura J, Sasaki S, Ahsan B, Sasaki A, Kuroshu R, Morishita S. Saito TL, et al. Bioinformatics. 2009 Aug 1;25(15):1856-61. doi: 10.1093/bioinformatics/btp350. Epub 2009 Jun 3. Bioinformatics. 2009. PMID: 19497937 Free PMC article.
High-dimensional and large-scale phenotyping of yeast mutants.
Ohya Y, Sese J, Yukawa M, Sano F, Nakatani Y, Saito TL, Saka A, Fukuda T, Ishihara S, Oka S, Suzuki G, Watanabe M, Hirata A, Ohtani M, Sawai H, Fraysse N, Latgé JP, François JM, Aebi M, Tanaka S, Muramatsu S, Araki H, Sonoike K, Nogami S, Morishita S. Ohya Y, et al. Among authors: saito tl. Proc Natl Acad Sci U S A. 2005 Dec 27;102(52):19015-20. doi: 10.1073/pnas.0509436102. Epub 2005 Dec 19. Proc Natl Acad Sci U S A. 2005. PMID: 16365294 Free PMC article.
SCMD: Saccharomyces cerevisiae Morphological Database.
Saito TL, Ohtani M, Sawai H, Sano F, Saka A, Watanabe D, Yukawa M, Ohya Y, Morishita S. Saito TL, et al. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D319-22. doi: 10.1093/nar/gkh113. Nucleic Acids Res. 2004. PMID: 14681423 Free PMC article.
UTGB/medaka: genomic resource database for medaka biology.
Ahsan B, Kobayashi D, Yamada T, Kasahara M, Sasaki S, Saito TL, Nagayasu Y, Doi K, Nakatani Y, Qu W, Jindo T, Shimada A, Naruse K, Toyoda A, Kuroki Y, Fujiyama A, Sasaki T, Shimizu A, Asakawa S, Shimizu N, Hashimoto S, Yang J, Lee Y, Matsushima K, Sugano S, Sakaizumi M, Narita T, Ohishi K, Haga S, Ohta F, Nomoto H, Nogata K, Morishita T, Endo T, Shin-I T, Takeda H, Kohara Y, Morishita S. Ahsan B, et al. Among authors: saito tl. Nucleic Acids Res. 2008 Jan;36(Database issue):D747-52. doi: 10.1093/nar/gkm765. Epub 2007 Oct 11. Nucleic Acids Res. 2008. PMID: 17932069 Free PMC article.
MachiBase: a Drosophila melanogaster 5'-end mRNA transcription database.
Ahsan B, Saito TL, Hashimoto S, Muramatsu K, Tsuda M, Sasaki A, Matsushima K, Aigaki T, Morishita S. Ahsan B, et al. Among authors: saito tl. Nucleic Acids Res. 2009 Jan;37(Database issue):D49-53. doi: 10.1093/nar/gkn694. Epub 2008 Oct 8. Nucleic Acids Res. 2009. PMID: 18842623 Free PMC article.
The transcription start site landscape of C. elegans.
Saito TL, Hashimoto S, Gu SG, Morton JJ, Stadler M, Blumenthal T, Fire A, Morishita S. Saito TL, et al. Genome Res. 2013 Aug;23(8):1348-61. doi: 10.1101/gr.151571.112. Epub 2013 May 1. Genome Res. 2013. PMID: 23636945 Free PMC article.
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