Sakamoto T - Search Results

1

Conformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complex.

Nomura Y, Sugiyama S, Sakamoto T, Miyakawa S, Adachi H, Takano K, Murakami S, Inoue T, Mori Y, Nakamura Y, Matsumura H. Nomura Y, et al. Among authors: sakamoto t. Nucleic Acids Res. 2010 Nov;38(21):7822-9. doi: 10.1093/nar/gkq615. Epub 2010 Jul 30. Nucleic Acids Res. 2010. PMID: 20675355 Free PMC article.

2

Solution structure of a SRP19 binding domain in human SRP RNA.

Sakamoto T, Morita S, Tabata K, Nakamura K, Kawai G. Sakamoto T, et al. J Biochem. 2002 Aug;132(2):177-82. doi: 10.1093/oxfordjournals.jbchem.a003207. J Biochem. 2002. PMID: 12153712 Free article.

3

Analysis of local convergence in NMR structure calculation for RNA by a classification system for nucleic acid structure (CSNA).

Someya T, Sakamoto T, Takasu A, Kawai G. Someya T, et al. Among authors: sakamoto t. Nucleosides Nucleotides Nucleic Acids. 2004;23(4):691-700. doi: 10.1081/NCN-120037509. Nucleosides Nucleotides Nucleic Acids. 2004. PMID: 15200031

4

NMR structures of double loops of an RNA aptamer against mammalian initiation factor 4A.

Sakamoto T, Oguro A, Kawai G, Ohtsu T, Nakamura Y. Sakamoto T, et al. Nucleic Acids Res. 2005 Feb 1;33(2):745-54. doi: 10.1093/nar/gki222. Print 2005. Nucleic Acids Res. 2005. PMID: 15687383 Free PMC article.

5

Solution structure of a GAAG tetraloop in helix 6 of SRP RNA from Pyrococcus furiosus.

Okada K, Takahashi M, Sakamoto T, Kawai G, Nakamura K, Kanai A. Okada K, et al. Among authors: sakamoto t. Nucleosides Nucleotides Nucleic Acids. 2006;25(4-6):383-95. doi: 10.1080/15257770600683979. Nucleosides Nucleotides Nucleic Acids. 2006. PMID: 16838833

6

Solution structure and functional importance of a conserved RNA hairpin of eel LINE UnaL2.

Nomura Y, Kajikawa M, Baba S, Nakazato S, Imai T, Sakamoto T, Okada N, Kawai G. Nomura Y, et al. Among authors: sakamoto t. Nucleic Acids Res. 2006;34(18):5184-93. doi: 10.1093/nar/gkl664. Epub 2006 Sep 25. Nucleic Acids Res. 2006. PMID: 17000640 Free PMC article.

7

Structural and molecular basis for hyperspecificity of RNA aptamer to human immunoglobulin G.

Miyakawa S, Nomura Y, Sakamoto T, Yamaguchi Y, Kato K, Yamazaki S, Nakamura Y. Miyakawa S, et al. Among authors: sakamoto t. RNA. 2008 Jun;14(6):1154-63. doi: 10.1261/rna.1005808. Epub 2008 Apr 25. RNA. 2008. PMID: 18441054 Free PMC article.

8

Crystallization and preliminary X-ray diffraction studies of an RNA aptamer in complex with the human IgG Fc fragment.

Sugiyama S, Nomura Y, Sakamoto T, Kitatani T, Kobayashi A, Miyakawa S, Takahashi Y, Adachi H, Takano K, Murakami S, Inoue T, Mori Y, Nakamura Y, Matsumura H. Sugiyama S, et al. Among authors: sakamoto t. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Oct 1;64(Pt 10):942-4. doi: 10.1107/S1744309108028236. Epub 2008 Sep 30. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008. PMID: 18931441 Free PMC article.

9

Characterization of RNA aptamers against SRP19 protein having sequences different from SRP RNA.

Haraguchi Y, Kuwasako K, Muto Y, Bessho Y, Nishimoto M, Yokoyama S, Kanai A, Kawai G, Sakamoto T. Haraguchi Y, et al. Among authors: sakamoto t. Nucleic Acids Symp Ser (Oxf). 2009;(53):265-6. doi: 10.1093/nass/nrp133. Nucleic Acids Symp Ser (Oxf). 2009. PMID: 19749362

10

An isostructural G-G to A-A substitution within the HIV RRE RNA switches the specificity towards arginine-rich peptides.

Aoyama S, Sugaya M, Kobayashi C, Masuda K, Maeda T, Sakamoto T, Kawai G, Katoh A, Harada K. Aoyama S, et al. Among authors: sakamoto t. Nucleic Acids Symp Ser (Oxf). 2009;(53):271-2. doi: 10.1093/nass/nrp136. Nucleic Acids Symp Ser (Oxf). 2009. PMID: 19749365

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