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Metagenomic analysis reveals a dynamic microbiome with diversified adaptive functions to utilize high lignocellulosic forages in the cattle rumen.
Gharechahi J, Vahidi MF, Bahram M, Han JL, Ding XZ, Salekdeh GH. Gharechahi J, et al. Among authors: salekdeh gh. ISME J. 2020 Dec 1. doi: 10.1038/s41396-020-00837-2. Online ahead of print. ISME J. 2020. PMID: 33262428
Publisher Correction: A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium, Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2020 Nov 18. doi: 10.1038/s41587-020-00769-4. Online ahead of print. Nat Biotechnol. 2020. PMID: 33208936
MCIC: Automated Identification of Cellulases From Metagenomic Data and Characterization Based on Temperature and pH Dependence.
Foroozandeh Shahraki M, Ariaeenejad S, Fallah Atanaki F, Zolfaghari B, Koshiba T, Kavousi K, Salekdeh GH. Foroozandeh Shahraki M, et al. Among authors: salekdeh gh. Front Microbiol. 2020 Oct 23;11:567863. doi: 10.3389/fmicb.2020.567863. eCollection 2020. Front Microbiol. 2020. PMID: 33193158 Free PMC article.
Whole genome re-sequencing reveals adaptation prior to the divergence of buffalo subspecies.
Rafiepour M, Ebrahimie E, Vahidi MF, Salekdeh GH, Niazi A, Dadpasand M, Liang D, Si J, Ding X, Han J, Zhang Y, Qanbari S. Rafiepour M, et al. Among authors: salekdeh gh. Genome Biol Evol. 2020 Nov 12:evaa231. doi: 10.1093/gbe/evaa231. Online ahead of print. Genome Biol Evol. 2020. PMID: 33179728 Free article.
A genomic catalog of Earth's microbiomes.
Nayfach S, Roux S, Seshadri R, Udwary D, Varghese N, Schulz F, Wu D, Paez-Espino D, Chen IM, Huntemann M, Palaniappan K, Ladau J, Mukherjee S, Reddy TBK, Nielsen T, Kirton E, Faria JP, Edirisinghe JN, Henry CS, Jungbluth SP, Chivian D, Dehal P, Wood-Charlson EM, Arkin AP, Tringe SG, Visel A; IMG/M Data Consortium, Woyke T, Mouncey NJ, Ivanova NN, Kyrpides NC, Eloe-Fadrosh EA. Nayfach S, et al. Nat Biotechnol. 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Online ahead of print. Nat Biotechnol. 2020. PMID: 33169036
The Dynamic Proteome of Oligodendrocyte Lineage Differentiation Features Planar Cell Polarity and Macroautophagy Pathways.
Pooyan P, Karamzadeh R, Mirzaei M, Meyfour A, Amirkhan A, Wu Y, Gupta V, Baharvand H, Javan M, Salekdeh GH. Pooyan P, et al. Among authors: salekdeh gh. Gigascience. 2020 Oct 31;9(11):giaa116. doi: 10.1093/gigascience/giaa116. Gigascience. 2020. PMID: 33128372 Free PMC article.
Human Proteome Project and Human Pluripotent Stem Cells: Odd Bedfellows or a Perfect Match?
Alikhani M, Karamzadeh R, Rahimi P, Adib S, Baharvand H, Salekdeh GH. Alikhani M, et al. Among authors: salekdeh gh. J Proteome Res. 2020 Dec 4;19(12):4747-4753. doi: 10.1021/acs.jproteome.0c00689. Epub 2020 Oct 30. J Proteome Res. 2020. PMID: 33124832
Proteome analysis of endometrial tissue from patients with PCOS reveals proteins predicted to impact the disease.
Alikhani M, Amjadi F, Mirzaei M, Wu Y, Shekari F, Ashrafi M, Mehdizadeh M, McKay M, Taleahmad S, Aghajanpour S, Gupta V, Baharvand H, Aflatoonian R, Salekdeh GH. Alikhani M, et al. Among authors: salekdeh gh. Mol Biol Rep. 2020 Nov;47(11):8763-8774. doi: 10.1007/s11033-020-05924-3. Epub 2020 Oct 24. Mol Biol Rep. 2020. PMID: 33098551
Retinal changes in Alzheimer's disease- integrated prospects of imaging, functional and molecular advances.
Gupta VB, Chitranshi N, den Haan J, Mirzaei M, You Y, Lim JK, Basavarajappa D, Godinez A, Di Angelantonio S, Sachdev P, Salekdeh GH, Bouwman F, Graham S, Gupta V. Gupta VB, et al. Among authors: salekdeh gh. Prog Retin Eye Res. 2020 Sep 2:100899. doi: 10.1016/j.preteyeres.2020.100899. Online ahead of print. Prog Retin Eye Res. 2020. PMID: 32890742 Review.
An efficient nano-biocatalyst for lignocellulosic biomass hydrolysis: Xylanase immobilization on organically modified biogenic mesoporous silica nanoparticles.
Ariaeenejad S, Jokar F, Hadian P, Ma'mani L, Gharaghani S, Fereidoonnezhad M, Salekdeh GH. Ariaeenejad S, et al. Among authors: salekdeh gh. Int J Biol Macromol. 2020 Dec 1;164:3462-3473. doi: 10.1016/j.ijbiomac.2020.08.211. Epub 2020 Sep 1. Int J Biol Macromol. 2020. PMID: 32888986
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