Sali A - Search Results

1

Combining electron microscopy and comparative protein structure modeling.

Topf M, Sali A. Topf M, et al. Among authors: sali a. Curr Opin Struct Biol. 2005 Oct;15(5):578-85. doi: 10.1016/j.sbi.2005.08.001. Curr Opin Struct Biol. 2005. PMID: 16118050 Review.

2

Advances in comparative protein-structure modelling.

Sánchez R, Sali A. Sánchez R, et al. Among authors: sali a. Curr Opin Struct Biol. 1997 Apr;7(2):206-14. doi: 10.1016/s0959-440x(97)80027-9. Curr Opin Struct Biol. 1997. PMID: 9094331 Review.

3

Tools for comparative protein structure modeling and analysis.

Eswar N, John B, Mirkovic N, Fiser A, Ilyin VA, Pieper U, Stuart AC, Marti-Renom MA, Madhusudhan MS, Yerkovich B, Sali A. Eswar N, et al. Among authors: sali a. Nucleic Acids Res. 2003 Jul 1;31(13):3375-80. doi: 10.1093/nar/gkg543. Nucleic Acids Res. 2003. PMID: 12824331 Free PMC article.

4

MODBASE, a database of annotated comparative protein structure models, and associated resources.

Pieper U, Eswar N, Braberg H, Madhusudhan MS, Davis FP, Stuart AC, Mirkovic N, Rossi A, Marti-Renom MA, Fiser A, Webb B, Greenblatt D, Huang CC, Ferrin TE, Sali A. Pieper U, et al. Among authors: sali a. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D217-22. doi: 10.1093/nar/gkh095. Nucleic Acids Res. 2004. PMID: 14681398 Free PMC article.

5

A structural perspective on protein-protein interactions.

Russell RB, Alber F, Aloy P, Davis FP, Korkin D, Pichaud M, Topf M, Sali A. Russell RB, et al. Among authors: sali a. Curr Opin Struct Biol. 2004 Jun;14(3):313-24. doi: 10.1016/j.sbi.2004.04.006. Curr Opin Struct Biol. 2004. PMID: 15193311 Review.

6

Structural characterization of components of protein assemblies by comparative modeling and electron cryo-microscopy.

Topf M, Baker ML, John B, Chiu W, Sali A. Topf M, et al. Among authors: sali a. J Struct Biol. 2005 Feb;149(2):191-203. doi: 10.1016/j.jsb.2004.11.004. J Struct Biol. 2005. PMID: 15681235

7

Structural characterization of assemblies from overall shape and subcomplex compositions.

Alber F, Kim MF, Sali A. Alber F, et al. Among authors: sali a. Structure. 2005 Mar;13(3):435-45. doi: 10.1016/j.str.2005.01.013. Structure. 2005. PMID: 15766545 Free article.

8

MODBASE: a database of annotated comparative protein structure models and associated resources.

Pieper U, Eswar N, Davis FP, Braberg H, Madhusudhan MS, Rossi A, Marti-Renom M, Karchin R, Webb BM, Eramian D, Shen MY, Kelly L, Melo F, Sali A. Pieper U, et al. Among authors: sali a. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D291-5. doi: 10.1093/nar/gkj059. Nucleic Acids Res. 2006. PMID: 16381869 Free PMC article.

9

Variable gap penalty for protein sequence-structure alignment.

Madhusudhan MS, Marti-Renom MA, Sanchez R, Sali A. Madhusudhan MS, et al. Among authors: sali a. Protein Eng Des Sel. 2006 Mar;19(3):129-33. doi: 10.1093/protein/gzj005. Epub 2006 Jan 19. Protein Eng Des Sel. 2006. PMID: 16423846

10

Refinement of protein structures by iterative comparative modeling and CryoEM density fitting.

Topf M, Baker ML, Marti-Renom MA, Chiu W, Sali A. Topf M, et al. Among authors: sali a. J Mol Biol. 2006 Apr 14;357(5):1655-68. doi: 10.1016/j.jmb.2006.01.062. Epub 2006 Feb 2. J Mol Biol. 2006. PMID: 16490207

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