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Multi-Timescale Dynamics in Intrinsically Disordered Proteins from NMR Relaxation and Molecular Simulation.
Salvi N, Abyzov A, Blackledge M. Salvi N, et al. J Phys Chem Lett. 2016 Jul 7;7(13):2483-9. doi: 10.1021/acs.jpclett.6b00885. Epub 2016 Jun 20. J Phys Chem Lett. 2016. PMID: 27300592
We present a novel framework in which a series of molecular dynamics (MD) simulations are used in combination with experimental (15)N relaxation measurements to characterize the ensemble of dynamic processes contributing to the observed rates. ...
We present a novel framework in which a series of molecular dynamics (MD) simulations are used in combination with experimental (15)N
Distribution of Pico- and Nanosecond Motions in Disordered Proteins from Nuclear Spin Relaxation.
Khan SN, Charlier C, Augustyniak R, Salvi N, Déjean V, Bodenhausen G, Lequin O, Pelupessy P, Ferrage F. Khan SN, et al. Among authors: salvi n. Biophys J. 2015 Sep 1;109(5):988-99. doi: 10.1016/j.bpj.2015.06.069. Biophys J. 2015. PMID: 26331256 Free PMC article.
The membrane anchor of the transcriptional activator SREBP is characterized by intrinsic conformational flexibility.
Linser R, Salvi N, Briones R, Rovó P, de Groot BL, Wagner G. Linser R, et al. Among authors: salvi n. Proc Natl Acad Sci U S A. 2015 Oct 6;112(40):12390-5. doi: 10.1073/pnas.1513782112. Epub 2015 Sep 21. Proc Natl Acad Sci U S A. 2015. PMID: 26392539 Free PMC article.
Large-Scale Conformational Dynamics Control H5N1 Influenza Polymerase PB2 Binding to Importin α.
Delaforge E, Milles S, Bouvignies G, Bouvier D, Boivin S, Salvi N, Maurin D, Martel A, Round A, Lemke EA, Jensen MR, Hart DJ, Blackledge M. Delaforge E, et al. Among authors: salvi n. J Am Chem Soc. 2015 Dec 9;137(48):15122-34. doi: 10.1021/jacs.5b07765. Epub 2015 Oct 16. J Am Chem Soc. 2015. PMID: 26424125
Identification of Dynamic Modes in an Intrinsically Disordered Protein Using Temperature-Dependent NMR Relaxation.
Abyzov A, Salvi N, Schneider R, Maurin D, Ruigrok RW, Jensen MR, Blackledge M. Abyzov A, et al. Among authors: salvi n. J Am Chem Soc. 2016 May 18;138(19):6240-51. doi: 10.1021/jacs.6b02424. Epub 2016 May 6. J Am Chem Soc. 2016. PMID: 27112095
The Role of Dynamics and Allostery in the Inhibition of the eIF4E/eIF4G Translation Initiation Factor Complex.
Salvi N, Papadopoulos E, Blackledge M, Wagner G. Salvi N, et al. Angew Chem Int Ed Engl. 2016 Jun 13;55(25):7176-9. doi: 10.1002/anie.201603254. Epub 2016 May 10. Angew Chem Int Ed Engl. 2016. PMID: 27162083 Free PMC article.
Dynamic Descriptions of Highly Flexible Molecules from NMR Dipolar Couplings: Physical Basis and Limitations.
Salvi N, Salmon L, Blackledge M. Salvi N, et al. J Am Chem Soc. 2017 Apr 12;139(14):5011-5014. doi: 10.1021/jacs.7b01566. Epub 2017 Mar 29. J Am Chem Soc. 2017. PMID: 28290683
Analytical Description of NMR Relaxation Highlights Correlated Dynamics in Intrinsically Disordered Proteins.
Salvi N, Abyzov A, Blackledge M. Salvi N, et al. Angew Chem Int Ed Engl. 2017 Nov 6;56(45):14020-14024. doi: 10.1002/anie.201706740. Epub 2017 Sep 14. Angew Chem Int Ed Engl. 2017. PMID: 28834051
Atomic resolution conformational dynamics of intrinsically disordered proteins from NMR spin relaxation.
Salvi N, Abyzov A, Blackledge M. Salvi N, et al. Prog Nucl Magn Reson Spectrosc. 2017 Nov;102-103:43-60. doi: 10.1016/j.pnmrs.2017.06.001. Epub 2017 Jul 10. Prog Nucl Magn Reson Spectrosc. 2017. PMID: 29157493 Review.
Here we review recent progress in the use of (15)N relaxation to identify local backbone dynamics and long-range chain-like motions in unfolded proteins....
Here we review recent progress in the use of (15)N relaxation to identify local backbone dynamics and long-range chain-like motions i …
Deciphering the Dynamic Interaction Profile of an Intrinsically Disordered Protein by NMR Exchange Spectroscopy.
Delaforge E, Kragelj J, Tengo L, Palencia A, Milles S, Bouvignies G, Salvi N, Blackledge M, Jensen MR. Delaforge E, et al. Among authors: salvi n. J Am Chem Soc. 2018 Jan 24;140(3):1148-1158. doi: 10.1021/jacs.7b12407. Epub 2018 Jan 11. J Am Chem Soc. 2018. PMID: 29276882
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