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Deep transcriptome annotation enables the discovery and functional characterization of cryptic small proteins.
Elife. 2017 Oct 30;6:e27860. doi: 10.7554/eLife.27860.
Elife. 2017.
PMID: 29083303
Free PMC article.
OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes.
Brunet MA, Brunelle M, Lucier JF, Delcourt V, Levesque M, Grenier F, Samandi S, Leblanc S, Aguilar JD, Dufour P, Jacques JF, Fournier I, Ouangraoua A, Scott MS, Boisvert FM, Roucou X.
Brunet MA, et al. Among authors: samandi s.
Nucleic Acids Res. 2019 Jan 8;47(D1):D403-D410. doi: 10.1093/nar/gky936.
Nucleic Acids Res. 2019.
PMID: 30299502
Free PMC article.
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Newfound Coding Potential of Transcripts Unveils Missing Members of Human Protein Communities.
Leblanc S, Brunet MA, Jacques JF, Lekehal AM, Duclos A, Tremblay A, Bruggeman-Gascon A, Samandi S, Brunelle M, Cohen AA, Scott MS, Roucou X.
Leblanc S, et al. Among authors: samandi s.
Genomics Proteomics Bioinformatics. 2023 Jun;21(3):515-534. doi: 10.1016/j.gpb.2022.09.008. Epub 2022 Sep 30.
Genomics Proteomics Bioinformatics. 2023.
PMID: 36183975
Free PMC article.
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UBB pseudogene 4 encodes functional ubiquitin variants.
Dubois ML, Meller A, Samandi S, Brunelle M, Frion J, Brunet MA, Toupin A, Beaudoin MC, Jacques JF, Lévesque D, Scott MS, Lavigne P, Roucou X, Boisvert FM.
Dubois ML, et al. Among authors: samandi s.
Nat Commun. 2020 Mar 11;11(1):1306. doi: 10.1038/s41467-020-15090-6.
Nat Commun. 2020.
PMID: 32161257
Free PMC article.
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