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Developmental fate and cellular maturity encoded in human regulatory DNA landscapes.
Stergachis AB, Neph S, Reynolds A, Humbert R, Miller B, Paige SL, Vernot B, Cheng JB, Thurman RE, Sandstrom R, Haugen E, Heimfeld S, Murry CE, Akey JM, Stamatoyannopoulos JA. Stergachis AB, et al. Among authors: sandstrom r. Cell. 2013 Aug 15;154(4):888-903. doi: 10.1016/j.cell.2013.07.020. Cell. 2013. PMID: 23953118 Free PMC article.
Sequencing newly replicated DNA reveals widespread plasticity in human replication timing.
Hansen RS, Thomas S, Sandstrom R, Canfield TK, Thurman RE, Weaver M, Dorschner MO, Gartler SM, Stamatoyannopoulos JA. Hansen RS, et al. Among authors: sandstrom r. Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):139-44. doi: 10.1073/pnas.0912402107. Epub 2009 Dec 4. Proc Natl Acad Sci U S A. 2010. PMID: 19966280 Free PMC article.
The accessible chromatin landscape of the human genome.
Thurman RE, Rynes E, Humbert R, Vierstra J, Maurano MT, Haugen E, Sheffield NC, Stergachis AB, Wang H, Vernot B, Garg K, John S, Sandstrom R, Bates D, Boatman L, Canfield TK, Diegel M, Dunn D, Ebersol AK, Frum T, Giste E, Johnson AK, Johnson EM, Kutyavin T, Lajoie B, Lee BK, Lee K, London D, Lotakis D, Neph S, Neri F, Nguyen ED, Qu H, Reynolds AP, Roach V, Safi A, Sanchez ME, Sanyal A, Shafer A, Simon JM, Song L, Vong S, Weaver M, Yan Y, Zhang Z, Zhang Z, Lenhard B, Tewari M, Dorschner MO, Hansen RS, Navas PA, Stamatoyannopoulos G, Iyer VR, Lieb JD, Sunyaev SR, Akey JM, Sabo PJ, Kaul R, Furey TS, Dekker J, Crawford GE, Stamatoyannopoulos JA. Thurman RE, et al. Among authors: sandstrom r. Nature. 2012 Sep 6;489(7414):75-82. doi: 10.1038/nature11232. Nature. 2012. PMID: 22955617 Free PMC article.
Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana.
Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Sullivan AM, et al. Among authors: sandstrom r. Cell Rep. 2014 Sep 25;8(6):2015-2030. doi: 10.1016/j.celrep.2014.08.019. Epub 2014 Sep 15. Cell Rep. 2014. PMID: 25220462 Free article.
Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.
Lazar JE, Stehling-Sun S, Nandakumar V, Wang H, Chee DR, Howard NP, Acosta R, Dunn D, Diegel M, Neri F, Castillo A, Ibarrientos S, Lee K, Lescano N, Van Biber B, Nelson J, Halow J, Sandstrom R, Bates D, Urnov FD, Stamatoyannopoulos JA, Funnell APW. Lazar JE, et al. Among authors: sandstrom r. Cell Rep. 2020 May 26;31(8):107676. doi: 10.1016/j.celrep.2020.107676. Cell Rep. 2020. PMID: 32460018 Free article.
Index and biological spectrum of human DNase I hypersensitive sites.
Meuleman W, Muratov A, Rynes E, Halow J, Lee K, Bates D, Diegel M, Dunn D, Neri F, Teodosiadis A, Reynolds A, Haugen E, Nelson J, Johnson A, Frerker M, Buckley M, Sandstrom R, Vierstra J, Kaul R, Stamatoyannopoulos J. Meuleman W, et al. Among authors: sandstrom r. Nature. 2020 Aug;584(7820):244-251. doi: 10.1038/s41586-020-2559-3. Epub 2020 Jul 29. Nature. 2020. PMID: 32728217 Free PMC article.
171 results