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Deciphering transcriptional plasticity in pancreatic ductal adenocarcinoma reveals alterations in sensory neuron innervation.

Genova E, Montrone M, Rangaswamy U, Diversi F, Schiavo I, Ferrarini D, Di Florio R, Longo I, Coscia M, Zamboni N, Demontis G, Veghini L, Corbo V, Sanges R, Heppenstall P. Genova E, et al. Among authors: sanges r. Mol Oncol. 2026 Mar 18. doi: 10.1002/1878-0261.70233. Online ahead of print. Mol Oncol. 2026. PMID: 41847880 Free article.

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Immature olfactory sensory neurons are intrinsically excitable and show maturation-dependent changes in voltage-gated Na⁺ and K⁺ currents.

Ricci C, Sánchez Triviño CA, Rangaswamy U, Tortella L, Sanges R, Boccaccio A, Menini A. Ricci C, et al. Among authors: sanges r. Pflugers Arch. 2026 Mar 6;478(3):26. doi: 10.1007/s00424-026-03159-y. Pflugers Arch. 2026. PMID: 41787035 Free PMC article.

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Polygenic variants in DNA repair genes are associated with neurodevelopmental disorders, regression and increased burdens of somatic variants and short tandem repeat expansions.

Cerminara M, Spirito G, Pandolfini L, Boeri S, Rosti G, Mancardi M, Pisciotta L, Fontana M, Bianchi A, Chen I, Ferrera L, Caroli F, Di Duca M, Cavalli A, Divizia MT, De Grandis E, Casabona S, Trova S, Vozzi D, Amoroso A, Obino L, Sanges R, Vecchi M, Nobili L, Zara F, Gustincich S, Puliti A. Cerminara M, et al. Among authors: sanges r. Genet Med. 2026 Mar;28(3):101661. doi: 10.1016/j.gim.2025.101661. Epub 2025 Dec 8. Genet Med. 2026. PMID: 41378475 Free article.

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Crip2 preserves hematopoietic stem and progenitor cell production through inhibition of Notch signals.

Aleman AG, Ulloa B, Nayak R, Ford C, Potts KS, de Sena-Tomás C, Vicioso C, Rangaswamy U, Elias HK, Kharas MG, Sanges R, Bowman T, Targoff KL. Aleman AG, et al. Among authors: sanges r. Development. 2026 Feb 15;153(4):dev204359. doi: 10.1242/dev.204359. Epub 2026 Feb 26. Development. 2026. PMID: 41601327 Free PMC article.

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New insights into neurodevelopmental disorders by whole genome sequencing of 100 families from Italy.

Spirito G, Trova S, Treves G, Farmanli K, Canonico MF, Fant A, Marangoni S, Furia F, Charrance D, Locci N, Gottardo S, Groppo F, Perseghin V, Toscano M, Bibbò E, Dontin SD, Cargnelutti C, Colliard M, Rosina A, Beoni AM, Bérard C, Coppe A, Serravalle P, Landuzzi F, Musacchia F, Amoroso A, Sanges R, Cavalli A, Vecchi M, Obino L, Gustincich S. Spirito G, et al. Among authors: sanges r. NPJ Genom Med. 2026 Feb 2;11(1):11. doi: 10.1038/s41525-025-00547-8. NPJ Genom Med. 2026. PMID: 41629344 Free PMC article.

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Compound Heterozygous Structural Variants in Cases with Unsolved PRKN-Associated Parkinson's Disease.

Fant A, Trova S, Monfrini E, Treves G, Musacchia F, Landuzzi F, Mandich P, Amoroso A, Sanges R, Pandolfini L, Cavallieri F, Valzania F, Fioravanti V, Di Rauso G, Brescia G, Valente EM, Tiranti V, Romito LM, Reale C, Garavaglia B, Elia AE, Cavalli A, Di Fonzo A, Vecchi M, Gustincich S. Fant A, et al. Among authors: sanges r. Mov Disord. 2025 Dec;40(12):2722-2731. doi: 10.1002/mds.70027. Epub 2025 Aug 30. Mov Disord. 2025. PMID: 40884420 Free PMC article.

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Molecular features of AHDC1: insights into an overlooked gene with broad functional potential.

Bochicchio S, Mazzetti A, Graziani L, Tartaglia GG, Gustincich S, Sanges R. Bochicchio S, et al. Among authors: sanges r. Hum Genet. 2025 Oct;144(9-10):901-916. doi: 10.1007/s00439-025-02765-7. Epub 2025 Aug 22. Hum Genet. 2025. PMID: 40844525 Free PMC article. Review.

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Internal ribosome entry sites enhance translation in trans in antisense non-coding SINEUP and circular RNAs.

D'Agostino S, Tettey-Matey A, Volpe M, Pierattini B, D'Agostino M, Smělá D, Ansaloni F, Broglia L, Lau P, Peruzzo O, Braccia C, Armirotti A, Scarpato M, Damiani D, Ros G, Di Carlo V, Maniscalco F, Bechara E, Tartaglia GG, Carninci P, Santoro C, Persichetti F, Pandolfini L, Simonetti A, Espinoza S, Zucchelli S, Sanges R, Bon C, Gustincich S. D'Agostino S, et al. Among authors: sanges r. Nucleic Acids Res. 2025 Aug 11;53(15):gkaf788. doi: 10.1093/nar/gkaf788. Nucleic Acids Res. 2025. PMID: 40823812 Free PMC article.

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De novo and inherited variants in DDX39B cause a novel neurodevelopmental syndrome.

Booth KTA, Jangam SV, Chui MMC, Treat K, Graziani L, Soldano A, Ruan Y, Wan-Hei Hui J, White K, Christensen CK, Lynnes T, Yamamoto S, Kanca O, Tsang MHY, Lynch SA, Mullegama SV, Baptista J, Iancu D, Joss SK, Wong SYY, Mak CCY, Kwong AKY, Bellen HJ, Conboy E, Sanges R, Leung AY, Wangler MF, Chung BHY, Vetrini F. Booth KTA, et al. Among authors: sanges r. Brain. 2025 Aug 1;148(8):2658-2670. doi: 10.1093/brain/awaf035. Brain. 2025. PMID: 39918047 Free PMC article.

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Nkx2.7 is a conserved regulator of craniofacial development.

Ford C, de Sena-Tomás C, Wun TTR, Aleman AG, Rangaswamy U, Leyhr J, Nuñez MI, Gao CZ, Nim HT, See M, Coppola U, Waxman JS, Ramialison M, Haitina T, Smeeton J, Sanges R, Targoff KL. Ford C, et al. Among authors: sanges r. Nat Commun. 2025 Apr 23;16(1):3802. doi: 10.1038/s41467-025-58821-3. Nat Commun. 2025. PMID: 40268889 Free PMC article.

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Genomic diversity in time and space in the toxic diatom Pseudo-nitzschia multistriata.

Mager S, Manfellotto F, Ruggiero A, Di Tuccio V, Cerino F, Accoroni S, Nishimura T, Mikhno M, Fattorini N, Turk Dermastia T, Arapov J, Skejic S, Rhodes L, Smith K, Longo A, Manzari C, Campbell L, Pesole G, Sanges R, Raffini F, Ruggiero MV, Russo MT, Montresor M, Ferrante MI. Mager S, et al. Among authors: sanges r. Harmful Algae. 2025 Feb;142:102791. doi: 10.1016/j.hal.2024.102791. Epub 2024 Dec 22. Harmful Algae. 2025. PMID: 39947866 Free article.

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From the genome's perspective: Bearing somatic retrotransposition to leverage the regulatory potential of L1 RNAs.

Mangoni D, Mazzetti A, Ansaloni F, Simi A, Tartaglia GG, Pandolfini L, Gustincich S, Sanges R. Mangoni D, et al. Among authors: sanges r. Bioessays. 2025 Feb;47(2):e2400125. doi: 10.1002/bies.202400125. Epub 2024 Nov 9. Bioessays. 2025. PMID: 39520370 Free PMC article. Review.

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Foxg1 regulates translation of neocortical neuronal genes, including the main NMDA receptor subunit gene, Grin1.

Artimagnella O, Maftei ES, Esposito M, Sanges R, Mallamaci A. Artimagnella O, et al. Among authors: sanges r. BMC Biol. 2024 Aug 26;22(1):180. doi: 10.1186/s12915-024-01979-x. BMC Biol. 2024. PMID: 39183266 Free PMC article.

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Paternal starvation affects metabolic gene expression during zebrafish offspring development and lifelong fitness.

Jimenez-Gonzalez A, Ansaloni F, Nebendahl C, Alavioon G, Murray D, Robak W, Sanges R, Müller F, Immler S. Jimenez-Gonzalez A, et al. Among authors: sanges r. Mol Ecol. 2024 Mar;33(6):e17296. doi: 10.1111/mec.17296. Epub 2024 Feb 15. Mol Ecol. 2024. PMID: 38361456 Free article.

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LINE-1 regulates cortical development by acting as long non-coding RNAs.

Mangoni D, Simi A, Lau P, Armaos A, Ansaloni F, Codino A, Damiani D, Floreani L, Di Carlo V, Vozzi D, Persichetti F, Santoro C, Pandolfini L, Tartaglia GG, Sanges R, Gustincich S. Mangoni D, et al. Among authors: sanges r. Nat Commun. 2023 Aug 17;14(1):4974. doi: 10.1038/s41467-023-40743-7. Nat Commun. 2023. PMID: 37591988 Free PMC article.

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Exploratory analysis of L1 retrotransposons expression in autism.

Spirito G, Filosi M, Domenici E, Mangoni D, Gustincich S, Sanges R. Spirito G, et al. Among authors: sanges r. Mol Autism. 2023 Jun 28;14(1):22. doi: 10.1186/s13229-023-00554-5. Mol Autism. 2023. PMID: 37381037 Free PMC article.

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In silico characterisation of minor wave genes and LINE-1s transcriptional dynamics at murine zygotic genome activation.

Ansaloni F, Gustincich S, Sanges R. Ansaloni F, et al. Among authors: sanges r. Front Cell Dev Biol. 2023 Jun 14;11:1124266. doi: 10.3389/fcell.2023.1124266. eCollection 2023. Front Cell Dev Biol. 2023. PMID: 37389353 Free PMC article.

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SINEUP non-coding RNA activity depends on specific N6-methyladenosine nucleotides.

Pierattini B, D'Agostino S, Bon C, Peruzzo O, Alendar A, Codino A, Ros G, Persichetti F, Sanges R, Carninci P, Santoro C, Espinoza S, Valentini P, Pandolfini L, Gustincich S. Pierattini B, et al. Among authors: sanges r. Mol Ther Nucleic Acids. 2023 Apr 7;32:402-414. doi: 10.1016/j.omtn.2023.04.002. eCollection 2023 Jun 13. Mol Ther Nucleic Acids. 2023. PMID: 37187707 Free PMC article.

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Piwil2 (Mili) sustains neurogenesis and prevents cellular senescence in the postnatal hippocampus.

Gasperini C, Tuntevski K, Beatini S, Pelizzoli R, Lo Van A, Mangoni D, Cossu RM, Pascarella G, Bianchini P, Bielefeld P, Scarpato M, Pons-Espinal M, Sanges R, Diaspro A, Fitzsimons CP, Carninci P, Gustincich S, De Pietri Tonelli D. Gasperini C, et al. Among authors: sanges r. EMBO Rep. 2023 Feb 6;24(2):e53801. doi: 10.15252/embr.202153801. Epub 2022 Dec 6. EMBO Rep. 2023. PMID: 36472244 Free PMC article.

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The miR-430 locus with extreme promoter density forms a transcription body during the minor wave of zygotic genome activation.

Hadzhiev Y, Wheatley L, Cooper L, Ansaloni F, Whalley C, Chen Z, Finaurini S, Gustincich S, Sanges R, Burgess S, Beggs A, Müller F. Hadzhiev Y, et al. Among authors: sanges r. Dev Cell. 2023 Jan 23;58(2):155-170.e8. doi: 10.1016/j.devcel.2022.12.007. Dev Cell. 2023. PMID: 36693321 Free PMC article.

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Transposons Acting as Competitive Endogenous RNAs: In-Silico Evidence from Datasets Characterised by L1 Overexpression.

Esposito M, Gualandi N, Spirito G, Ansaloni F, Gustincich S, Sanges R. Esposito M, et al. Among authors: sanges r. Biomedicines. 2022 Dec 17;10(12):3279. doi: 10.3390/biomedicines10123279. Biomedicines. 2022. PMID: 36552034 Free PMC article.

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TEspeX: consensus-specific quantification of transposable element expression preventing biases from exonized fragments.

Ansaloni F, Gualandi N, Esposito M, Gustincich S, Sanges R. Ansaloni F, et al. Among authors: sanges r. Bioinformatics. 2022 Sep 15;38(18):4430-4433. doi: 10.1093/bioinformatics/btac526. Bioinformatics. 2022. PMID: 35876845 Free PMC article.

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Effects of spike protein and toxin-like peptides found in COVID-19 patients on human 3D neuronal/glial model undergoing differentiation: Possible implications for SARS-CoV-2 impact on brain development.

Pistollato F, Petrillo M, Clerbaux LA, Leoni G, Ponti J, Bogni A, Brogna C, Cristoni S, Sanges R, Mendoza-de Gyves E, Fabbri M, Querci M, Soares H, Munoz A, Whelan M, Van de Eede G. Pistollato F, et al. Among authors: sanges r. Reprod Toxicol. 2022 Aug;111:34-48. doi: 10.1016/j.reprotox.2022.04.011. Epub 2022 May 5. Reprod Toxicol. 2022. PMID: 35525527 Free PMC article.

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Supporting Cells of the Human Olfactory Epithelium Co-Express the Lipid Scramblase TMEM16F and ACE2 and May Cause Smell Loss by SARS-CoV-2 Spike-Induced Syncytia.

Hernandez-Clavijo A, Gonzalez-Velandia KY, Rangaswamy U, Guarneri G, Boscolo-Rizzo P, Tofanelli M, Gardenal N, Sanges R, Dibattista M, Tirelli G, Menini A. Hernandez-Clavijo A, et al. Among authors: sanges r. Cell Physiol Biochem. 2022 Jun 7;56(3):254-269. doi: 10.33594/000000531. Cell Physiol Biochem. 2022. PMID: 35670331 Free article.

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Meta-Analysis Suggests That Intron Retention Can Affect Quantification of Transposable Elements from RNA-Seq Data.

Gualandi N, Iperi C, Esposito M, Ansaloni F, Gustincich S, Sanges R. Gualandi N, et al. Among authors: sanges r. Biology (Basel). 2022 May 27;11(6):826. doi: 10.3390/biology11060826. Biology (Basel). 2022. PMID: 35741347 Free PMC article.

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Identification of LINE retrotransposons and long non-coding RNAs expressed in the octopus brain.

Petrosino G, Ponte G, Volpe M, Zarrella I, Ansaloni F, Langella C, Di Cristina G, Finaurini S, Russo MT, Basu S, Musacchia F, Ristoratore F, Pavlinic D, Benes V, Ferrante MI, Albertin C, Simakov O, Gustincich S, Fiorito G, Sanges R. Petrosino G, et al. Among authors: sanges r. BMC Biol. 2022 May 18;20(1):116. doi: 10.1186/s12915-022-01303-5. BMC Biol. 2022. PMID: 35581640 Free PMC article.

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Trade-off between sex and growth in diatoms: Molecular mechanisms and demographic implications.

Annunziata R, Mele BH, Marotta P, Volpe M, Entrambasaguas L, Mager S, Stec K, d'Alcalà MR, Sanges R, Finazzi G, Iudicone D, Montresor M, Ferrante MI. Annunziata R, et al. Among authors: sanges r. Sci Adv. 2022 Jan 21;8(3):eabj9466. doi: 10.1126/sciadv.abj9466. Epub 2022 Jan 19. Sci Adv. 2022. PMID: 35044817 Free PMC article.

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Transposable element activation promotes neurodegeneration in a Drosophila model of Huntington's disease.

Casale AM, Liguori F, Ansaloni F, Cappucci U, Finaurini S, Spirito G, Persichetti F, Sanges R, Gustincich S, Piacentini L. Casale AM, et al. Among authors: sanges r. iScience. 2021 Dec 28;25(1):103702. doi: 10.1016/j.isci.2021.103702. eCollection 2022 Jan 21. iScience. 2021. PMID: 35036881 Free PMC article.

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Analysis of LINE1 Retrotransposons in Huntington's Disease.

Floreani L, Ansaloni F, Mangoni D, Agostoni E, Sanges R, Persichetti F, Gustincich S. Floreani L, et al. Among authors: sanges r. Front Cell Neurosci. 2022 Jan 14;15:743797. doi: 10.3389/fncel.2021.743797. eCollection 2021. Front Cell Neurosci. 2022. PMID: 35095420 Free PMC article.

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Natural SINEUP RNAs in Autism Spectrum Disorders: RAB11B-AS1 Dysregulation in a Neuronal CHD8 Suppression Model Leads to RAB11B Protein Increase.

Zarantonello G, Arnoldi M, Filosi M, Tebaldi T, Spirito G, Barbieri A, Gustincich S, Sanges R, Domenici E, Di Leva F, Biagioli M. Zarantonello G, et al. Among authors: sanges r. Front Genet. 2021 Nov 22;12:745229. doi: 10.3389/fgene.2021.745229. eCollection 2021. Front Genet. 2021. PMID: 34880900 Free PMC article.

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SINEUPs: a novel toolbox for RNA therapeutics.

Espinoza S, Bon C, Valentini P, Pierattini B, Matey AT, Damiani D, Pulcrano S, Sanges R, Persichetti F, Takahashi H, Carninci P, Santoro C, Cotella D, Gustincich S. Espinoza S, et al. Among authors: sanges r. Essays Biochem. 2021 Oct 27;65(4):775-789. doi: 10.1042/EBC20200114. Essays Biochem. 2021. PMID: 34623427 Free PMC article. Review.

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Type I interferon activation in RAS-associated autoimmune leukoproliferative disease (RALD).

Papa R, Rusmini M, Schena F, Traggiai E, Coccia MC, Caorsi R, Arrigo S, Pasetti F, Signa S, Barone P, Santamaria G, Spirito G, Sanges R, Vozzi D, Cavalli A, Gustincich S, Ravelli A, Gattorno M, Ceccherini I, Volpi S. Papa R, et al. Among authors: sanges r. Clin Immunol. 2021 Oct;231:108837. doi: 10.1016/j.clim.2021.108837. Epub 2021 Aug 26. Clin Immunol. 2021. PMID: 34455097

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The prolyl-isomerase PIN1 is essential for nuclear Lamin-B structure and function and protects heterochromatin under mechanical stress.

Napoletano F, Ferrari Bravo G, Voto IAP, Santin A, Celora L, Campaner E, Dezi C, Bertossi A, Valentino E, Santorsola M, Rustighi A, Fajner V, Maspero E, Ansaloni F, Cancila V, Valenti CF, Santo M, Artimagnella OB, Finaurini S, Gioia U, Polo S, Sanges R, Tripodo C, Mallamaci A, Gustincich S, d'Adda di Fagagna F, Mantovani F, Specchia V, Del Sal G. Napoletano F, et al. Among authors: sanges r. Cell Rep. 2021 Sep 14;36(11):109694. doi: 10.1016/j.celrep.2021.109694. Cell Rep. 2021. PMID: 34525372 Free article.

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Prolyl 3-Hydroxylase 2 Is a Molecular Player of Angiogenesis.

Pignata P, Apicella I, Cicatiello V, Puglisi C, Magliacane Trotta S, Sanges R, Tarallo V, De Falco S. Pignata P, et al. Among authors: sanges r. Int J Mol Sci. 2021 Apr 9;22(8):3896. doi: 10.3390/ijms22083896. Int J Mol Sci. 2021. PMID: 33918807 Free PMC article.

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Case Report: Whole Exome Sequencing Revealed Disease-Causing Variants in Two Genes in a Patient With Autism Spectrum Disorder, Intellectual Disability, Hyperactivity, Sleep and Gastrointestinal Disturbances.

Cerminara M, Spirito G, Pisciotta L, Squillario M, Servetti M, Divizia MT, Lerone M, Berloco B, Boeri S, Nobili L, Vozzi D, Sanges R, Gustincich S, Puliti A. Cerminara M, et al. Among authors: sanges r. Front Genet. 2021 Feb 18;12:625564. doi: 10.3389/fgene.2021.625564. eCollection 2021. Front Genet. 2021. PMID: 33679889 Free PMC article.

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De Novo Transcriptome Assembly and Gene Expression Profiling of the Copepod Calanus helgolandicus Feeding on the PUA-Producing Diatom Skeletonema marinoi.

Asai S, Sanges R, Lauritano C, Lindeque PK, Esposito F, Ianora A, Carotenuto Y. Asai S, et al. Among authors: sanges r. Mar Drugs. 2020 Jul 27;18(8):392. doi: 10.3390/md18080392. Mar Drugs. 2020. PMID: 32727111 Free PMC article.

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A human minisatellite hosts an alternative transcription start site for NPRL3 driving its expression in a repeat number-dependent manner.

Bertuzzi M, Tang D, Calligaris R, Vlachouli C, Finaurini S, Sanges R, Goldwurm S, Catalan M, Antonutti L, Manganotti P, Pizzolato G, Pezzoli G, Persichetti F, Carninci P, Gustincich S. Bertuzzi M, et al. Among authors: sanges r. Hum Mutat. 2020 Apr;41(4):807-824. doi: 10.1002/humu.23974. Epub 2020 Jan 31. Hum Mutat. 2020. PMID: 31898848

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A draft genome sequence of the elusive giant squid, Architeuthis dux.

da Fonseca RR, Couto A, Machado AM, Brejova B, Albertin CB, Silva F, Gardner P, Baril T, Hayward A, Campos A, Ribeiro ÂM, Barrio-Hernandez I, Hoving HJ, Tafur-Jimenez R, Chu C, Frazão B, Petersen B, Peñaloza F, Musacchia F, Alexander GC, Osório H, Winkelmann I, Simakov O, Rasmussen S, Rahman MZ, Pisani D, Vinther J, Jarvis E, Zhang G, Strugnell JM, Castro LFC, Fedrigo O, Patricio M, Li Q, Rocha S, Antunes A, Wu Y, Ma B, Sanges R, Vinar T, Blagoev B, Sicheritz-Ponten T, Nielsen R, Gilbert MTP. da Fonseca RR, et al. Among authors: sanges r. Gigascience. 2020 Jan 1;9(1):giz152. doi: 10.1093/gigascience/giz152. Gigascience. 2020. PMID: 31942620 Free PMC article.

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Intraspecific Diversity in the Cold Stress Response of Transposable Elements in the Diatom Leptocylindrus aporus.

Pargana A, Musacchia F, Sanges R, Russo MT, Ferrante MI, Bowler C, Zingone A. Pargana A, et al. Among authors: sanges r. Genes (Basel). 2019 Dec 20;11(1):9. doi: 10.3390/genes11010009. Genes (Basel). 2019. PMID: 31861932 Free PMC article.

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The RNA-binding protein ILF3 binds to transposable element sequences in SINEUP lncRNAs.

Fasolo F, Patrucco L, Volpe M, Bon C, Peano C, Mignone F, Carninci P, Persichetti F, Santoro C, Zucchelli S, Sblattero D, Sanges R, Cotella D, Gustincich S. Fasolo F, et al. Among authors: sanges r. FASEB J. 2019 Dec;33(12):13572-13589. doi: 10.1096/fj.201901618RR. Epub 2019 Oct 25. FASEB J. 2019. PMID: 31570000 Free PMC article.

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Impact of polymorphic transposable elements on transcription in lymphoblastoid cell lines from public data.

Spirito G, Mangoni D, Sanges R, Gustincich S. Spirito G, et al. Among authors: sanges r. BMC Bioinformatics. 2019 Nov 22;20(Suppl 9):495. doi: 10.1186/s12859-019-3113-x. BMC Bioinformatics. 2019. PMID: 31757210 Free PMC article.

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Exploratory analysis of transposable elements expression in the C. elegans early embryo.

Ansaloni F, Scarpato M, Di Schiavi E, Gustincich S, Sanges R. Ansaloni F, et al. Among authors: sanges r. BMC Bioinformatics. 2019 Nov 22;20(Suppl 9):484. doi: 10.1186/s12859-019-3088-7. BMC Bioinformatics. 2019. PMID: 31757208 Free PMC article.

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A ceRNA Circuitry Involving the Long Noncoding RNA Klhl14-AS, Pax8, and Bcl2 Drives Thyroid Carcinogenesis.

Credendino SC, Bellone ML, Lewin N, Amendola E, Sanges R, Basu S, Sepe R, Decaussin-Petrucci M, Tinto N, Fusco A, De Felice M, De Vita G. Credendino SC, et al. Among authors: sanges r. Cancer Res. 2019 Nov 15;79(22):5746-5757. doi: 10.1158/0008-5472.CAN-19-0039. Epub 2019 Sep 26. Cancer Res. 2019. PMID: 31558562

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Meta-Omics Reveals Genetic Flexibility of Diatom Nitrogen Transporters in Response to Environmental Changes.

Busseni G, Rocha Jimenez Vieira F, Amato A, Pelletier E, Pierella Karlusich JJ, Ferrante MI, Wincker P, Rogato A, Bowler C, Sanges R, Maiorano L, Chiurazzi M, Ribera d'Alcalà M, Caputi L, Iudicone D. Busseni G, et al. Among authors: sanges r. Mol Biol Evol. 2019 Nov 1;36(11):2522-2535. doi: 10.1093/molbev/msz157. Mol Biol Evol. 2019. PMID: 31259367 Free PMC article.

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Identification of sex determination genes and their evolution in Phlebotominae sand flies (Diptera, Nematocera).

Petrella V, Aceto S, Colonna V, Saccone G, Sanges R, Polanska N, Volf P, Gradoni L, Bongiorno G, Salvemini M. Petrella V, et al. Among authors: sanges r. BMC Genomics. 2019 Jun 25;20(1):522. doi: 10.1186/s12864-019-5898-4. BMC Genomics. 2019. PMID: 31238870 Free PMC article.

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The survey and reference assisted assembly of the Octopus vulgaris genome.

Zarrella I, Herten K, Maes GE, Tai S, Yang M, Seuntjens E, Ritschard EA, Zach M, Styfhals R, Sanges R, Simakov O, Ponte G, Fiorito G. Zarrella I, et al. Among authors: sanges r. Sci Data. 2019 Apr 1;6(1):13. doi: 10.1038/s41597-019-0017-6. Sci Data. 2019. PMID: 30931949 Free PMC article.

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In silico Identification and Expression of Protocadherin Gene Family in Octopus vulgaris.

Styfhals R, Seuntjens E, Simakov O, Sanges R, Fiorito G. Styfhals R, et al. Among authors: sanges r. Front Physiol. 2019 Jan 14;9:1905. doi: 10.3389/fphys.2018.01905. eCollection 2018. Front Physiol. 2019. PMID: 30692932 Free PMC article.

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MRP3 is a sex determining gene in the diatom Pseudo-nitzschia multistriata.

Russo MT, Vitale L, Entrambasaguas L, Anestis K, Fattorini N, Romano F, Minucci C, De Luca P, Biffali E, Vyverman W, Sanges R, Montresor M, Ferrante MI. Russo MT, et al. Among authors: sanges r. Nat Commun. 2018 Nov 28;9(1):5050. doi: 10.1038/s41467-018-07496-0. Nat Commun. 2018. PMID: 30487611 Free PMC article.

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ClusterScan: simple and generalistic identification of genomic clusters.

Volpe M, Miralto M, Gustincich S, Sanges R. Volpe M, et al. Among authors: sanges r. Bioinformatics. 2018 Nov 15;34(22):3921-3923. doi: 10.1093/bioinformatics/bty486. Bioinformatics. 2018. PMID: 29912285

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Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom Skeletonema marinoi.

Amato A, Sabatino V, Nylund GM, Bergkvist J, Basu S, Andersson MX, Sanges R, Godhe A, Kiørboe T, Selander E, Ferrante MI. Amato A, et al. Among authors: sanges r. ISME J. 2018 Jun;12(6):1594-1604. doi: 10.1038/s41396-018-0094-0. Epub 2018 Mar 29. ISME J. 2018. PMID: 29599523 Free PMC article.

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Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus.

Nanjappa D, Sanges R, Ferrante MI, Zingone A. Nanjappa D, et al. Among authors: sanges r. BMC Genomics. 2017 Oct 23;18(1):813. doi: 10.1186/s12864-017-4210-8. BMC Genomics. 2017. PMID: 29061117 Free PMC article.

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Tissue-specific transcriptomic profiling provides new insights into the reproductive ecology and biology of the iconic seagrass species Posidonia oceanica.

Entrambasaguas L, Jahnke M, Biffali E, Borra M, Sanges R, Marín-Guirao L, Procaccini G. Entrambasaguas L, et al. Among authors: sanges r. Mar Genomics. 2017 Oct;35:51-61. doi: 10.1016/j.margen.2017.05.006. Epub 2017 May 26. Mar Genomics. 2017. PMID: 28566222

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De novo assembly of a transcriptome from the eggs and early embryos of Astropecten aranciacus.

Musacchia F, Vasilev F, Borra M, Biffali E, Sanges R, Santella L, Chun JT. Musacchia F, et al. Among authors: sanges r. PLoS One. 2017 Sep 5;12(9):e0184090. doi: 10.1371/journal.pone.0184090. eCollection 2017. PLoS One. 2017. PMID: 28873438 Free PMC article.

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Distribution, Community Composition, and Potential Metabolic Activity of Bacterioplankton in an Urbanized Mediterranean Sea Coastal Zone.

Richa K, Balestra C, Piredda R, Benes V, Borra M, Passarelli A, Margiotta F, Saggiomo M, Biffali E, Sanges R, Scanlan DJ, Casotti R. Richa K, et al. Among authors: sanges r. Appl Environ Microbiol. 2017 Aug 17;83(17):e00494-17. doi: 10.1128/AEM.00494-17. Print 2017 Sep 1. Appl Environ Microbiol. 2017. PMID: 28667110 Free PMC article.

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Genomewide transcriptional reprogramming in the seagrass Cymodocea nodosa under experimental ocean acidification.

Ruocco M, Musacchia F, Olivé I, Costa MM, Barrote I, Santos R, Sanges R, Procaccini G, Silva J. Ruocco M, et al. Among authors: sanges r. Mol Ecol. 2017 Aug;26(16):4241-4259. doi: 10.1111/mec.14204. Epub 2017 Jul 10. Mol Ecol. 2017. PMID: 28614601

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Finding a partner in the ocean: molecular and evolutionary bases of the response to sexual cues in a planktonic diatom.

Basu S, Patil S, Mapleson D, Russo MT, Vitale L, Fevola C, Maumus F, Casotti R, Mock T, Caccamo M, Montresor M, Sanges R, Ferrante MI. Basu S, et al. Among authors: sanges r. New Phytol. 2017 Jul;215(1):140-156. doi: 10.1111/nph.14557. Epub 2017 Apr 21. New Phytol. 2017. PMID: 28429538 Free PMC article.

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Marine diatoms change their gene expression profile when exposed to microscale turbulence under nutrient replete conditions.

Amato A, Dell'Aquila G, Musacchia F, Annunziata R, Ugarte A, Maillet N, Carbone A, Ribera d'Alcalà M, Sanges R, Iudicone D, Ferrante MI. Amato A, et al. Among authors: sanges r. Sci Rep. 2017 Jun 19;7(1):3826. doi: 10.1038/s41598-017-03741-6. Sci Rep. 2017. PMID: 28630429 Free PMC article.

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Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.

Mock T, Otillar RP, Strauss J, McMullan M, Paajanen P, Schmutz J, Salamov A, Sanges R, Toseland A, Ward BJ, Allen AE, Dupont CL, Frickenhaus S, Maumus F, Veluchamy A, Wu T, Barry KW, Falciatore A, Ferrante MI, Fortunato AE, Glöckner G, Gruber A, Hipkin R, Janech MG, Kroth PG, Leese F, Lindquist EA, Lyon BR, Martin J, Mayer C, Parker M, Quesneville H, Raymond JA, Uhlig C, Valas RE, Valentin KU, Worden AZ, Armbrust EV, Clark MD, Bowler C, Green BR, Moulton V, van Oosterhout C, Grigoriev IV. Mock T, et al. Among authors: sanges r. Nature. 2017 Jan 26;541(7638):536-540. doi: 10.1038/nature20803. Epub 2017 Jan 16. Nature. 2017. PMID: 28092920 Free article.

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Tissue- and Cell Type-Specific Expression of the Long Noncoding RNA Klhl14-AS in Mouse.

Credendino SC, Lewin N, de Oliveira M, Basu S, D'Andrea B, Amendola E, Di Guida L, Nardone A, Sanges R, De Felice M, De Vita G. Credendino SC, et al. Among authors: sanges r. Int J Genomics. 2017;2017:9769171. doi: 10.1155/2017/9769171. Epub 2017 Sep 10. Int J Genomics. 2017. PMID: 29082235 Free PMC article.

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The Tetraodon nigroviridis reference transcriptome: developmental transition, length retention and microsynteny of long non-coding RNAs in a compact vertebrate genome.

Basu S, Hadzhiev Y, Petrosino G, Nepal C, Gehrig J, Armant O, Ferg M, Strahle U, Sanges R, Müller F. Basu S, et al. Among authors: sanges r. Sci Rep. 2016 Sep 15;6:33210. doi: 10.1038/srep33210. Sci Rep. 2016. PMID: 27628538 Free PMC article.

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Multisignal control of expression of the LHCX protein family in the marine diatom Phaeodactylum tricornutum.

Taddei L, Stella GR, Rogato A, Bailleul B, Fortunato AE, Annunziata R, Sanges R, Thaler M, Lepetit B, Lavaud J, Jaubert M, Finazzi G, Bouly JP, Falciatore A. Taddei L, et al. Among authors: sanges r. J Exp Bot. 2016 Jun;67(13):3939-51. doi: 10.1093/jxb/erw198. Epub 2016 May 25. J Exp Bot. 2016. PMID: 27225826 Free PMC article.

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On the genome base composition of teleosts: the effect of environment and lifestyle.

Tarallo A, Angelini C, Sanges R, Yagi M, Agnisola C, D'Onofrio G. Tarallo A, et al. Among authors: sanges r. BMC Genomics. 2016 Mar 2;17:173. doi: 10.1186/s12864-016-2537-1. BMC Genomics. 2016. PMID: 26935583 Free PMC article.

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The upstream regulatory sequence of the light harvesting complex Lhcf2 gene of the marine diatom Phaeodactylum tricornutum enhances transcription in an orientation- and distance-independent fashion.

Russo MT, Annunziata R, Sanges R, Ferrante MI, Falciatore A. Russo MT, et al. Among authors: sanges r. Mar Genomics. 2015 Dec;24 Pt 1:69-79. doi: 10.1016/j.margen.2015.06.010. Epub 2015 Jun 25. Mar Genomics. 2015. PMID: 26117181

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Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta.

Patil S, Moeys S, von Dassow P, Huysman MJ, Mapleson D, De Veylder L, Sanges R, Vyverman W, Montresor M, Ferrante MI. Patil S, et al. Among authors: sanges r. BMC Genomics. 2015 Nov 14;16:930. doi: 10.1186/s12864-015-1983-5. BMC Genomics. 2015. PMID: 26572248 Free PMC article.

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Transcriptome sequencing of three Pseudo-nitzschia species reveals comparable gene sets and the presence of Nitric Oxide Synthase genes in diatoms.

Di Dato V, Musacchia F, Petrosino G, Patil S, Montresor M, Sanges R, Ferrante MI. Di Dato V, et al. Among authors: sanges r. Sci Rep. 2015 Jul 20;5:12329. doi: 10.1038/srep12329. Sci Rep. 2015. PMID: 26189990 Free PMC article.

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Annocript: a flexible pipeline for the annotation of transcriptomes able to identify putative long noncoding RNAs.

Musacchia F, Basu S, Petrosino G, Salvemini M, Sanges R. Musacchia F, et al. Among authors: sanges r. Bioinformatics. 2015 Jul 1;31(13):2199-201. doi: 10.1093/bioinformatics/btv106. Epub 2015 Feb 19. Bioinformatics. 2015. PMID: 25701574

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SINEUPs: A new class of natural and synthetic antisense long non-coding RNAs that activate translation.

Zucchelli S, Cotella D, Takahashi H, Carrieri C, Cimatti L, Fasolo F, Jones MH, Sblattero D, Sanges R, Santoro C, Persichetti F, Carninci P, Gustincich S. Zucchelli S, et al. Among authors: sanges r. RNA Biol. 2015;12(8):771-9. doi: 10.1080/15476286.2015.1060395. RNA Biol. 2015. PMID: 26259533 Free PMC article. Review.

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De novo assembly and transcriptome analysis of the Mediterranean fruit fly Ceratitis capitata early embryos.

Salvemini M, Arunkumar KP, Nagaraju J, Sanges R, Petrella V, Tomar A, Zhang H, Zheng W, Saccone G. Salvemini M, et al. Among authors: sanges r. PLoS One. 2014 Dec 4;9(12):e114191. doi: 10.1371/journal.pone.0114191. eCollection 2014. PLoS One. 2014. PMID: 25474564 Free PMC article.

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Synechococcus: 3 billion years of global dominance.

Dvořák P, Casamatta DA, Poulíčková A, Hašler P, Ondřej V, Sanges R. Dvořák P, et al. Among authors: sanges r. Mol Ecol. 2014 Nov;23(22):5538-51. doi: 10.1111/mec.12948. Epub 2014 Oct 21. Mol Ecol. 2014. PMID: 25283338

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Response of the seagrass Posidonia oceanica to different light environments: Insights from a combined molecular and photo-physiological study.

Dattolo E, Ruocco M, Brunet C, Lorenti M, Lauritano C, D'Esposito D, De Luca P, Sanges R, Mazzuca S, Procaccini G. Dattolo E, et al. Among authors: sanges r. Mar Environ Res. 2014 Oct;101:225-236. doi: 10.1016/j.marenvres.2014.07.010. Epub 2014 Aug 1. Mar Environ Res. 2014. PMID: 25129449

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Fibroblast growth factor signalling controls nervous system patterning and pigment cell formation in Ciona intestinalis.

Racioppi C, Kamal AK, Razy-Krajka F, Gambardella G, Zanetti L, di Bernardo D, Sanges R, Christiaen LA, Ristoratore F. Racioppi C, et al. Among authors: sanges r. Nat Commun. 2014 Sep 5;5:4830. doi: 10.1038/ncomms5830. Nat Commun. 2014. PMID: 25189217 Free PMC article.

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The combination of transcriptomics and informatics identifies pathways targeted by miR-204 during neurogenesis and axon guidance.

Conte I, Merella S, Garcia-Manteiga JM, Migliore C, Lazarevic D, Carrella S, Marco-Ferreres R, Avellino R, Davidson NP, Emmett W, Sanges R, Bockett N, Van Heel D, Meroni G, Bovolenta P, Stupka E, Banfi S. Conte I, et al. Among authors: sanges r. Nucleic Acids Res. 2014 Jul;42(12):7793-806. doi: 10.1093/nar/gku498. Epub 2014 Jun 3. Nucleic Acids Res. 2014. PMID: 24895435 Free PMC article.

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Targeted transgene integration overcomes variability of position effects in zebrafish.

Roberts JA, Miguel-Escalada I, Slovik KJ, Walsh KT, Hadzhiev Y, Sanges R, Stupka E, Marsh EK, Balciuniene J, Balciunas D, Müller F. Roberts JA, et al. Among authors: sanges r. Development. 2014 Feb;141(3):715-24. doi: 10.1242/dev.100347. Development. 2014. PMID: 24449846 Free PMC article.

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Insights into the transcriptome of the marine copepod Calanus helgolandicus feeding on the oxylipin-producing diatom Skeletonema marinoi.

Carotenuto Y, Dattolo E, Lauritano C, Pisano F, Sanges R, Miralto A, Procaccini G, Ianora A. Carotenuto Y, et al. Among authors: sanges r. Harmful Algae. 2014 Jan;31:153-162. doi: 10.1016/j.hal.2013.11.002. Epub 2013 Dec 11. Harmful Algae. 2014. PMID: 28040104

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Highly conserved elements discovered in vertebrates are present in non-syntenic loci of tunicates, act as enhancers and can be transcribed during development.

Sanges R, Hadzhiev Y, Gueroult-Bellone M, Roure A, Ferg M, Meola N, Amore G, Basu S, Brown ER, De Simone M, Petrera F, Licastro D, Strähle U, Banfi S, Lemaire P, Birney E, Müller F, Stupka E. Sanges R, et al. Nucleic Acids Res. 2013 Apr 1;41(6):3600-18. doi: 10.1093/nar/gkt030. Epub 2013 Feb 7. Nucleic Acids Res. 2013. PMID: 23393190 Free PMC article.

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Examples of sequence conservation analyses capture a subset of mouse long non-coding RNAs sharing homology with fish conserved genomic elements.

Basu S, Müller F, Sanges R. Basu S, et al. Among authors: sanges r. BMC Bioinformatics. 2013;14 Suppl 7(Suppl 7):S14. doi: 10.1186/1471-2105-14-S7-S14. Epub 2013 Apr 22. BMC Bioinformatics. 2013. PMID: 23815359 Free PMC article.

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Transcription initiation arising from E-cadherin/CDH1 intron2: a novel protein isoform that increases gastric cancer cell invasion and angiogenesis.

Pinheiro H, Carvalho J, Oliveira P, Ferreira D, Pinto MT, Osório H, Licastro D, Bordeira-Carriço R, Jordan P, Lazarevic D, Sanges R, Stupka E, Huntsman D, Seruca R, Oliveira C. Pinheiro H, et al. Among authors: sanges r. Hum Mol Genet. 2012 Oct 1;21(19):4253-69. doi: 10.1093/hmg/dds248. Epub 2012 Jun 29. Hum Mol Genet. 2012. PMID: 22752307

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Characterization of the intronic portion of cadherin superfamily members, common cancer orchestrators.

Oliveira P, Sanges R, Huntsman D, Stupka E, Oliveira C. Oliveira P, et al. Among authors: sanges r. Eur J Hum Genet. 2012 Aug;20(8):878-83. doi: 10.1038/ejhg.2012.11. Epub 2012 Feb 8. Eur J Hum Genet. 2012. PMID: 22317972 Free PMC article.

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Identification of microRNA-regulated gene networks by expression analysis of target genes.

Gennarino VA, D'Angelo G, Dharmalingam G, Fernandez S, Russolillo G, Sanges R, Mutarelli M, Belcastro V, Ballabio A, Verde P, Sardiello M, Banfi S. Gennarino VA, et al. Among authors: sanges r. Genome Res. 2012 Jun;22(6):1163-72. doi: 10.1101/gr.130435.111. Epub 2012 Feb 24. Genome Res. 2012. PMID: 22345618 Free PMC article.

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Genome-wide mapping of Myc binding and gene regulation in serum-stimulated fibroblasts.

Perna D, Fagà G, Verrecchia A, Gorski MM, Barozzi I, Narang V, Khng J, Lim KC, Sung WK, Sanges R, Stupka E, Oskarsson T, Trumpp A, Wei CL, Müller H, Amati B. Perna D, et al. Among authors: sanges r. Oncogene. 2012 Mar 29;31(13):1695-709. doi: 10.1038/onc.2011.359. Epub 2011 Aug 22. Oncogene. 2012. PMID: 21860422 Free PMC article.

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In vivo role of different domains and of phosphorylation in the transcription factor Nkx2-1.

Silberschmidt D, Rodriguez-Mallon A, Mithboakar P, Calì G, Amendola E, Sanges R, Zannini M, Scarfò M, De Luca P, Nitsch L, Di Lauro R, De Felice M. Silberschmidt D, et al. Among authors: sanges r. BMC Dev Biol. 2011 Feb 23;11:9. doi: 10.1186/1471-213X-11-9. BMC Dev Biol. 2011. PMID: 21345181 Free PMC article.

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Mutant SOD1 and mitochondrial damage alter expression and splicing of genes controlling neuritogenesis in models of neurodegeneration.

Lenzken SC, Romeo V, Zolezzi F, Cordero F, Lamorte G, Bonanno D, Biancolini D, Cozzolino M, Pesaresi MG, Maracchioni A, Sanges R, Achsel T, Carrì MT, Calogero RA, Barabino SM. Lenzken SC, et al. Among authors: sanges r. Hum Mutat. 2011 Feb;32(2):168-82. doi: 10.1002/humu.21394. Epub 2011 Jan 25. Hum Mutat. 2011. PMID: 21120952

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Gene expression analysis of the emergence of epileptiform activity after focal injection of kainic acid into mouse hippocampus.

Motti D, Le Duigou C, Eugène E, Chemaly N, Wittner L, Lazarevic D, Krmac H, Marstrand T, Valen E, Sanges R, Stupka E, Sandelin A, Cherubini E, Gustincich S, Miles R. Motti D, et al. Among authors: sanges r. Eur J Neurosci. 2010 Oct;32(8):1364-79. doi: 10.1111/j.1460-9568.2010.07403.x. Eur J Neurosci. 2010. PMID: 20950280

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A locus on mouse chromosome 2 is involved in susceptibility to congenital hypothyroidism and contains an essential gene expressed in thyroid.

Amendola E, Sanges R, Galvan A, Dathan N, Manenti G, Ferrandino G, Alvino FM, Di Palma T, Scarfò M, Zannini M, Dragani TA, De Felice M, Di Lauro R. Amendola E, et al. Among authors: sanges r. Endocrinology. 2010 Apr;151(4):1948-58. doi: 10.1210/en.2009-1240. Epub 2010 Feb 16. Endocrinology. 2010. PMID: 20160132

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Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements.

Licastro D, Gennarino VA, Petrera F, Sanges R, Banfi S, Stupka E. Licastro D, et al. Among authors: sanges r. BMC Genomics. 2010 Mar 4;11:151. doi: 10.1186/1471-2164-11-151. BMC Genomics. 2010. PMID: 20202189 Free PMC article.

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Germline CDH1 deletions in hereditary diffuse gastric cancer families.

Oliveira C, Senz J, Kaurah P, Pinheiro H, Sanges R, Haegert A, Corso G, Schouten J, Fitzgerald R, Vogelsang H, Keller G, Dwerryhouse S, Grimmer D, Chin SF, Yang HK, Jackson CE, Seruca R, Roviello F, Stupka E, Caldas C, Huntsman D. Oliveira C, et al. Among authors: sanges r. Hum Mol Genet. 2009 May 1;18(9):1545-55. doi: 10.1093/hmg/ddp046. Epub 2009 Jan 24. Hum Mol Genet. 2009. PMID: 19168852 Free PMC article.

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The UniTrap resource: tools for the biologist enabling optimized use of gene trap clones.

Roma G, Sardiello M, Cobellis G, Cruz P, Lago G, Sanges R, Stupka E. Roma G, et al. Among authors: sanges r. Nucleic Acids Res. 2008 Jan;36(Database issue):D741-6. doi: 10.1093/nar/gkm825. Epub 2007 Oct 16. Nucleic Acids Res. 2008. PMID: 17942430 Free PMC article.

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oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.

Sanges R, Cordero F, Calogero RA. Sanges R, et al. Bioinformatics. 2007 Dec 15;23(24):3406-8. doi: 10.1093/bioinformatics/btm469. Epub 2007 Sep 17. Bioinformatics. 2007. PMID: 17875544

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The TATA-binding protein regulates maternal mRNA degradation and differential zygotic transcription in zebrafish.

Ferg M, Sanges R, Gehrig J, Kiss J, Bauer M, Lovas A, Szabo M, Yang L, Straehle U, Pankratz MJ, Olasz F, Stupka E, Müller F. Ferg M, et al. Among authors: sanges r. EMBO J. 2007 Sep 5;26(17):3945-56. doi: 10.1038/sj.emboj.7601821. Epub 2007 Aug 16. EMBO J. 2007. PMID: 17703193 Free PMC article.

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Shuffling of cis-regulatory elements is a pervasive feature of the vertebrate lineage.

Sanges R, Kalmar E, Claudiani P, D'Amato M, Muller F, Stupka E. Sanges R, et al. Genome Biol. 2006;7(7):R56. doi: 10.1186/gb-2006-7-7-r56. Genome Biol. 2006. PMID: 16859531 Free PMC article.

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Concordant morphologic and gene expression data show that a vaccine halts HER-2/neu preneoplastic lesions.

Quaglino E, Rolla S, Iezzi M, Spadaro M, Musiani P, De Giovanni C, Lollini PL, Lanzardo S, Forni G, Sanges R, Crispi S, De Luca P, Calogero R, Cavallo F. Quaglino E, et al. Among authors: sanges r. J Clin Invest. 2004 Mar;113(5):709-17. doi: 10.1172/JCI19850. J Clin Invest. 2004. PMID: 14991069 Free PMC article.

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Differential divergence of three human pseudoautosomal genes and their mouse homologs: implications for sex chromosome evolution.

Gianfrancesco F, Sanges R, Esposito T, Tempesta S, Rao E, Rappold G, Archidiacono N, Graves JA, Forabosco A, D'Urso M. Gianfrancesco F, et al. Among authors: sanges r. Genome Res. 2001 Dec;11(12):2095-100. doi: 10.1101/gr.197001. Genome Res. 2001. PMID: 11731500 Free PMC article.

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