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Influenza viral hemagglutinin complicated shape is advantageous to its binding affinity for sialosaccharide receptor.
Sawada T, Hashimoto T, Nakano H, Suzuki T, Suzuki Y, Kawaoka Y, Ishida H, Kiso M. Sawada T, et al. Biochem Biophys Res Commun. 2007 Mar 30;355(1):6-9. doi: 10.1016/j.bbrc.2006.12.239. Epub 2007 Feb 5. Biochem Biophys Res Commun. 2007. PMID: 17292854
Why does avian influenza A virus hemagglutinin bind to avian receptor stronger than to human receptor? Ab initio fragment molecular orbital studies.
Sawada T, Hashimoto T, Nakano H, Suzuki T, Ishida H, Kiso M. Sawada T, et al. Biochem Biophys Res Commun. 2006 Dec 8;351(1):40-3. doi: 10.1016/j.bbrc.2006.09.165. Epub 2006 Oct 12. Biochem Biophys Res Commun. 2006. PMID: 17052692
Haemagglutinin mutations responsible for the binding of H5N1 influenza A viruses to human-type receptors.
Yamada S, Suzuki Y, Suzuki T, Le MQ, Nidom CA, Sakai-Tagawa Y, Muramoto Y, Ito M, Kiso M, Horimoto T, Shinya K, Sawada T, Kiso M, Usui T, Murata T, Lin Y, Hay A, Haire LF, Stevens DJ, Russell RJ, Gamblin SJ, Skehel JJ, Kawaoka Y. Yamada S, et al. Nature. 2006 Nov 16;444(7117):378-82. doi: 10.1038/nature05264. Nature. 2006. PMID: 17108965
A combined effective fragment potential-fragment molecular orbital method. II. Analytic gradient and application to the geometry optimization of solvated tetraglycine and chignolin.
Nagata T, Fedorov DG, Sawada T, Kitaura K, Gordon MS. Nagata T, et al. J Chem Phys. 2011 Jan 21;134(3):034110. doi: 10.1063/1.3517110. J Chem Phys. 2011. PMID: 21261333
Ab initio fragment molecular orbital studies of influenza virus hemagglutinin-sialosaccharide complexes toward chemical clarification about the virus host range determination.
Sawada T, Hashimoto T, Tokiwa H, Suzuki T, Nakano H, Ishida H, Kiso M, Suzuki Y. Sawada T, et al. Glycoconj J. 2008 Dec;25(9):805-15. doi: 10.1007/s10719-008-9141-9. Epub 2008 Jun 24. Glycoconj J. 2008. PMID: 18574690
Ab initio base fragment molecular orbital studies of influenza viral hemagglutinin HA1 full-domains in complex with sialoside receptors.
Sawada T, Hashimoto T, Tokiwa H, Suzuki T, Nakano H, Ishida H, Kiso M, Suzuki Y. Sawada T, et al. J Mol Genet Med. 2008 Nov 26;3(1):133-42. J Mol Genet Med. 2008. PMID: 19565017 Free PMC article.
Analysis of solute-solvent interactions in the fragment molecular orbital method interfaced with effective fragment potentials: theory and application to a solvated griffithsin-carbohydrate complex.
Nagata T, Fedorov DG, Sawada T, Kitaura K. Nagata T, et al. J Phys Chem A. 2012 Sep 13;116(36):9088-99. doi: 10.1021/jp304991a. Epub 2012 Aug 28. J Phys Chem A. 2012. PMID: 22894829
Comparison of High-Resolution Manometry in Patients Complaining of Dysphagia among Patients with or without Diabetes Mellitus.
Muroi K, Miyahara R, Funasaka K, Furukawa K, Sawada T, Maeda K, Yamamura T, Ishikawa T, Ohno E, Nakamura M, Kawashima H, Onoue T, Arima H, Hirooka Y, Fujishiro M. Muroi K, et al. Among authors: sawada t. Digestion. 2020 Sep 9:1-9. doi: 10.1159/000510081. Online ahead of print. Digestion. 2020. PMID: 32906118 Free article.
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