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Structural analysis of a helical peptide unfolding pathway.
Diana D, Ziaco B, Scarabelli G, Pedone C, Colombo G, D'Andrea LD, Fattorusso R. Diana D, et al. Chemistry. 2010 May 10;16(18):5400-7. doi: 10.1002/chem.200903428. Chemistry. 2010. PMID: 20358558
Structural determinants of the unusual helix stability of a de novo engineered vascular endothelial growth factor (VEGF) mimicking peptide.
Diana D, Ziaco B, Colombo G, Scarabelli G, Romanelli A, Pedone C, Fattorusso R, D'Andrea LD. Diana D, et al. Chemistry. 2008;14(14):4164-6. doi: 10.1002/chem.200800180. Chemistry. 2008. PMID: 18384035 No abstract available.
Mapping the Processivity Determinants of the Kinesin-3 Motor Domain.
Scarabelli G, Soppina V, Yao XQ, Atherton J, Moores CA, Verhey KJ, Grant BJ. Scarabelli G, et al. Biophys J. 2015 Oct 20;109(8):1537-40. doi: 10.1016/j.bpj.2015.08.027. Biophys J. 2015. PMID: 26488644 Free PMC article.
Exploiting antigenic diversity for vaccine design: the chlamydia ArtJ paradigm.
Soriani M, Petit P, Grifantini R, Petracca R, Gancitano G, Frigimelica E, Nardelli F, Garcia C, Spinelli S, Scarabelli G, Fiorucci S, Affentranger R, Ferrer-Navarro M, Zacharias M, Colombo G, Vuillard L, Daura X, Grandi G. Soriani M, et al. J Biol Chem. 2010 Sep 24;285(39):30126-38. doi: 10.1074/jbc.M110.118513. Epub 2010 Jun 30. J Biol Chem. 2010. PMID: 20592031 Free PMC article.
Mapping the structural and dynamical features of kinesin motor domains.
Scarabelli G, Grant BJ. Scarabelli G, et al. PLoS Comput Biol. 2013;9(11):e1003329. doi: 10.1371/journal.pcbi.1003329. Epub 2013 Nov 7. PLoS Comput Biol. 2013. PMID: 24244137 Free PMC article.
Integrating protein structural dynamics and evolutionary analysis with Bio3D.
Skjærven L, Yao XQ, Scarabelli G, Grant BJ. Skjærven L, et al. Among authors: scarabelli g. BMC Bioinformatics. 2014 Dec 10;15(1):399. doi: 10.1186/s12859-014-0399-6. BMC Bioinformatics. 2014. PMID: 25491031 Free PMC article.
Neck linker docking is critical for Kinesin-1 force generation in cells but at a cost to motor speed and processivity.
Budaitis BG, Jariwala S, Reinemann DN, Schimert KI, Scarabelli G, Grant BJ, Sept D, Lang MJ, Verhey KJ. Budaitis BG, et al. Among authors: scarabelli g. Elife. 2019 May 14;8:e44146. doi: 10.7554/eLife.44146. Elife. 2019. PMID: 31084716 Free PMC article.
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