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A gene expression map of Arabidopsis thaliana development.
Schmid M, Davison TS, Henz SR, Pape UJ, Demar M, Vingron M, Schölkopf B, Weigel D, Lohmann JU. Schmid M, et al. Among authors: scholkopf b. Nat Genet. 2005 May;37(5):501-6. doi: 10.1038/ng1543. Epub 2005 Apr 3. Nat Genet. 2005. PMID: 15806101
EPIBLASTER-fast exhaustive two-locus epistasis detection strategy using graphical processing units.
Kam-Thong T, Czamara D, Tsuda K, Borgwardt K, Lewis CM, Erhardt-Lehmann A, Hemmer B, Rieckmann P, Daake M, Weber F, Wolf C, Ziegler A, Pütz B, Holsboer F, Schölkopf B, Müller-Myhsok B. Kam-Thong T, et al. Among authors: scholkopf b. Eur J Hum Genet. 2011 Apr;19(4):465-71. doi: 10.1038/ejhg.2010.196. Epub 2010 Dec 8. Eur J Hum Genet. 2011. PMID: 21150885 Free PMC article.
At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana.
Laubinger S, Zeller G, Henz SR, Sachsenberg T, Widmer CK, Naouar N, Vuylsteke M, Schölkopf B, Rätsch G, Weigel D. Laubinger S, et al. Among authors: scholkopf b. Genome Biol. 2008;9(7):R112. doi: 10.1186/gb-2008-9-7-r112. Epub 2008 Jul 9. Genome Biol. 2008. PMID: 18613972 Free PMC article.
Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana.
Clark RM, Schweikert G, Toomajian C, Ossowski S, Zeller G, Shinn P, Warthmann N, Hu TT, Fu G, Hinds DA, Chen H, Frazer KA, Huson DH, Schölkopf B, Nordborg M, Rätsch G, Ecker JR, Weigel D. Clark RM, et al. Among authors: scholkopf b. Science. 2007 Jul 20;317(5836):338-42. doi: 10.1126/science.1138632. Science. 2007. PMID: 17641193
Fast protein classification with multiple networks.
Tsuda K, Shin H, Schölkopf B. Tsuda K, et al. Among authors: scholkopf b. Bioinformatics. 2005 Sep 1;21 Suppl 2:ii59-65. doi: 10.1093/bioinformatics/bti1110. Bioinformatics. 2005. PMID: 16204126
easyGWAS: A Cloud-Based Platform for Comparing the Results of Genome-Wide Association Studies.
Grimm DG, Roqueiro D, Salomé PA, Kleeberger S, Greshake B, Zhu W, Liu C, Lippert C, Stegle O, Schölkopf B, Weigel D, Borgwardt KM. Grimm DG, et al. Among authors: scholkopf b. Plant Cell. 2017 Jan;29(1):5-19. doi: 10.1105/tpc.16.00551. Epub 2016 Dec 16. Plant Cell. 2017. PMID: 27986896 Free PMC article.
Crowdsourced analysis of clinical trial data to predict amyotrophic lateral sclerosis progression.
Küffner R, Zach N, Norel R, Hawe J, Schoenfeld D, Wang L, Li G, Fang L, Mackey L, Hardiman O, Cudkowicz M, Sherman A, Ertaylan G, Grosse-Wentrup M, Hothorn T, van Ligtenberg J, Macke JH, Meyer T, Schölkopf B, Tran L, Vaughan R, Stolovitzky G, Leitner ML. Küffner R, et al. Among authors: scholkopf b. Nat Biotechnol. 2015 Jan;33(1):51-7. doi: 10.1038/nbt.3051. Epub 2014 Nov 2. Nat Biotechnol. 2015. PMID: 25362243
Artificial intelligence: Learning to see and act.
Schölkopf B. Schölkopf B. Nature. 2015 Feb 26;518(7540):486-7. doi: 10.1038/518486a. Nature. 2015. PMID: 25719660 No abstract available.
RASE: recognition of alternatively spliced exons in C.elegans.
Rätsch G, Sonnenburg S, Schölkopf B. Rätsch G, et al. Among authors: scholkopf b. Bioinformatics. 2005 Jun;21 Suppl 1:i369-77. doi: 10.1093/bioinformatics/bti1053. Bioinformatics. 2005. PMID: 15961480
GLIDE: GPU-based linear regression for detection of epistasis.
Kam-Thong T, Azencott CA, Cayton L, Pütz B, Altmann A, Karbalai N, Sämann PG, Schölkopf B, Müller-Myhsok B, Borgwardt KM. Kam-Thong T, et al. Among authors: scholkopf b. Hum Hered. 2012;73(4):220-36. doi: 10.1159/000341885. Epub 2012 Sep 4. Hum Hered. 2012. PMID: 22965145
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