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Verification of systems biology research in the age of collaborative competition.
Meyer P, Alexopoulos LG, Bonk T, Califano A, Cho CR, de la Fuente A, de Graaf D, Hartemink AJ, Hoeng J, Ivanov NV, Koeppl H, Linding R, Marbach D, Norel R, Peitsch MC, Rice JJ, Royyuru A, Schacherer F, Sprengel J, Stolle K, Vitkup D, Stolovitzky G. Meyer P, et al. Among authors: schacherer f. Nat Biotechnol. 2011 Sep 8;29(9):811-5. doi: 10.1038/nbt.1968. Nat Biotechnol. 2011. PMID: 21904331 Free article. No abstract available.
The BioPAX community standard for pathway data sharing.
Demir E, Cary MP, Paley S, Fukuda K, Lemer C, Vastrik I, Wu G, D'Eustachio P, Schaefer C, Luciano J, Schacherer F, Martinez-Flores I, Hu Z, Jimenez-Jacinto V, Joshi-Tope G, Kandasamy K, Lopez-Fuentes AC, Mi H, Pichler E, Rodchenkov I, Splendiani A, Tkachev S, Zucker J, Gopinath G, Rajasimha H, Ramakrishnan R, Shah I, Syed M, Anwar N, Babur O, Blinov M, Brauner E, Corwin D, Donaldson S, Gibbons F, Goldberg R, Hornbeck P, Luna A, Murray-Rust P, Neumann E, Ruebenacker O, Samwald M, van Iersel M, Wimalaratne S, Allen K, Braun B, Whirl-Carrillo M, Cheung KH, Dahlquist K, Finney A, Gillespie M, Glass E, Gong L, Haw R, Honig M, Hubaut O, Kane D, Krupa S, Kutmon M, Leonard J, Marks D, Merberg D, Petri V, Pico A, Ravenscroft D, Ren L, Shah N, Sunshine M, Tang R, Whaley R, Letovksy S, Buetow KH, Rzhetsky A, Schachter V, Sobral BS, Dogrusoz U, McWeeney S, Aladjem M, Birney E, Collado-Vides J, Goto S, Hucka M, Le Novère N, Maltsev N, Pandey A, Thomas P, Wingender E, Karp PD, Sander C, Bader GD. Demir E, et al. Among authors: schacherer f. Nat Biotechnol. 2010 Sep;28(9):935-42. doi: 10.1038/nbt.1666. Epub 2010 Sep 9. Nat Biotechnol. 2010. PMID: 20829833 Free PMC article.
Integrating pathway data for systems pathology.
Wingender E, Hogan J, Schacherer F, Potapov AP, Kel-Margoulis O. Wingender E, et al. Among authors: schacherer f. In Silico Biol. 2007;7(2 Suppl):S17-25. In Silico Biol. 2007. PMID: 17822386
Building a knowledge base for systems pathology.
Michael H, Hogan J, Kel A, Kel-Margoulis O, Schacherer F, Voss N, Wingender E. Michael H, et al. Among authors: schacherer f. Brief Bioinform. 2008 Nov;9(6):518-31. doi: 10.1093/bib/bbn038. Epub 2008 Dec 10. Brief Bioinform. 2008. PMID: 19073714 Review.
TRANSFAC: an integrated system for gene expression regulation.
Wingender E, Chen X, Hehl R, Karas H, Liebich I, Matys V, Meinhardt T, Prüss M, Reuter I, Schacherer F. Wingender E, et al. Among authors: schacherer f. Nucleic Acids Res. 2000 Jan 1;28(1):316-9. doi: 10.1093/nar/28.1.316. Nucleic Acids Res. 2000. PMID: 10592259 Free PMC article.
The TRANSFAC system on gene expression regulation.
Wingender E, Chen X, Fricke E, Geffers R, Hehl R, Liebich I, Krull M, Matys V, Michael H, Ohnhäuser R, Prüss M, Schacherer F, Thiele S, Urbach S. Wingender E, et al. Among authors: schacherer f. Nucleic Acids Res. 2001 Jan 1;29(1):281-3. doi: 10.1093/nar/29.1.281. Nucleic Acids Res. 2001. PMID: 11125113 Free PMC article.
14 results