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11 results
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How the vertebrates were made: selective pruning of a double-duplicated genome.
Manning G, Scheeff E. Manning G, et al. Among authors: scheeff e. BMC Biol. 2010 Dec 13;8:144. doi: 10.1186/1741-7007-8-144. BMC Biol. 2010. PMID: 21144066 Free PMC article.
Application of protein structure alignments to iterated hidden Markov model protocols for structure prediction.
Scheeff ED, Bourne PE. Scheeff ED, et al. BMC Bioinformatics. 2006 Sep 14;7:410. doi: 10.1186/1471-2105-7-410. BMC Bioinformatics. 2006. PMID: 16970830 Free PMC article.
Genomics, evolution, and crystal structure of a new family of bacterial spore kinases.
Scheeff ED, Axelrod HL, Miller MD, Chiu HJ, Deacon AM, Wilson IA, Manning G. Scheeff ED, et al. Proteins. 2010 May 1;78(6):1470-82. doi: 10.1002/prot.22663. Proteins. 2010. PMID: 20077512 Free PMC article.
Structure of the pseudokinase VRK3 reveals a degraded catalytic site, a highly conserved kinase fold, and a putative regulatory binding site.
Scheeff ED, Eswaran J, Bunkoczi G, Knapp S, Manning G. Scheeff ED, et al. Structure. 2009 Jan 14;17(1):128-38. doi: 10.1016/j.str.2008.10.018. Structure. 2009. PMID: 19141289 Free PMC article.
Con-Struct Map: a comparative contact map analysis tool.
Chung JL, Beaver JE, Scheeff ED, Bourne PE. Chung JL, et al. Among authors: scheeff ed. Bioinformatics. 2007 Sep 15;23(18):2491-2. doi: 10.1093/bioinformatics/btm356. Epub 2007 Aug 20. Bioinformatics. 2007. PMID: 17709340
Short Promoters in Viral Vectors Drive Selective Expression in Mammalian Inhibitory Neurons, but do not Restrict Activity to Specific Inhibitory Cell-Types.
Nathanson JL, Jappelli R, Scheeff ED, Manning G, Obata K, Brenner S, Callaway EM. Nathanson JL, et al. Among authors: scheeff ed. Front Neural Circuits. 2009 Nov 9;3:19. doi: 10.3389/neuro.04.019.2009. eCollection 2009. Front Neural Circuits. 2009. PMID: 19949461 Free PMC article.
Fundamentals of protein structure.
Scheeff ED, Fink JL. Scheeff ED, et al. Methods Biochem Anal. 2003;44:15-39. Methods Biochem Anal. 2003. PMID: 12647380 Review. No abstract available.
Structural evolution of the protein kinase-like superfamily.
Scheeff ED, Bourne PE. Scheeff ED, et al. PLoS Comput Biol. 2005 Oct;1(5):e49. doi: 10.1371/journal.pcbi.0010049. Epub 2005 Oct 21. PLoS Comput Biol. 2005. PMID: 16244704 Free PMC article.
CE-MC: a multiple protein structure alignment server.
Guda C, Lu S, Scheeff ED, Bourne PE, Shindyalov IN. Guda C, et al. Among authors: scheeff ed. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W100-3. doi: 10.1093/nar/gkh464. Nucleic Acids Res. 2004. PMID: 15215359 Free PMC article.
Molecular modeling of the intrastrand guanine-guanine DNA adducts produced by cisplatin and oxaliplatin.
Scheeff ED, Briggs JM, Howell SB. Scheeff ED, et al. Mol Pharmacol. 1999 Sep;56(3):633-43. Mol Pharmacol. 1999. PMID: 10462551
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