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16 results
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Fiji: an open-source platform for biological-image analysis.
Schindelin J, Arganda-Carreras I, Frise E, Kaynig V, Longair M, Pietzsch T, Preibisch S, Rueden C, Saalfeld S, Schmid B, Tinevez JY, White DJ, Hartenstein V, Eliceiri K, Tomancak P, Cardona A. Schindelin J, et al. Nat Methods. 2012 Jun 28;9(7):676-82. doi: 10.1038/nmeth.2019. Nat Methods. 2012. PMID: 22743772 Free PMC article.
TrackMate: An open and extensible platform for single-particle tracking.
Tinevez JY, Perry N, Schindelin J, Hoopes GM, Reynolds GD, Laplantine E, Bednarek SY, Shorte SL, Eliceiri KW. Tinevez JY, et al. Among authors: schindelin j. Methods. 2017 Feb 15;115:80-90. doi: 10.1016/j.ymeth.2016.09.016. Epub 2016 Oct 3. Methods. 2017. PMID: 27713081 Free article.
A high-level 3D visualization API for Java and ImageJ.
Schmid B, Schindelin J, Cardona A, Longair M, Heisenberg M. Schmid B, et al. Among authors: schindelin j. BMC Bioinformatics. 2010 May 21;11:274. doi: 10.1186/1471-2105-11-274. BMC Bioinformatics. 2010. PMID: 20492697 Free PMC article.
OpenSPIM: an open-access light-sheet microscopy platform.
Pitrone PG, Schindelin J, Stuyvenberg L, Preibisch S, Weber M, Eliceiri KW, Huisken J, Tomancak P. Pitrone PG, et al. Among authors: schindelin j. Nat Methods. 2013 Jul;10(7):598-9. doi: 10.1038/nmeth.2507. Epub 2013 Jun 9. Nat Methods. 2013. PMID: 23749304 Free PMC article. No abstract available.
ImageJ2: ImageJ for the next generation of scientific image data.
Rueden CT, Schindelin J, Hiner MC, DeZonia BE, Walter AE, Arena ET, Eliceiri KW. Rueden CT, et al. Among authors: schindelin j. BMC Bioinformatics. 2017 Nov 29;18(1):529. doi: 10.1186/s12859-017-1934-z. BMC Bioinformatics. 2017. PMID: 29187165 Free PMC article.
Genetic oscillations. A Doppler effect in embryonic pattern formation.
Soroldoni D, Jörg DJ, Morelli LG, Richmond DL, Schindelin J, Jülicher F, Oates AC. Soroldoni D, et al. Among authors: schindelin j. Science. 2014 Jul 11;345(6193):222-5. doi: 10.1126/science.1253089. Science. 2014. PMID: 25013078 Free PMC article.
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